Shewanella oncorhynchi: RA178_03930
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Entry
RA178_03930 CDS
T09381
Name
(GenBank) MacB family efflux pump subunit
KO
K05685
macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
Organism
sog
Shewanella oncorhynchi
Pathway
sog02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RA178_03930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_03930
Transporters [BR:
sog02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
RA178_03930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
ABC_tran
FtsX
AAA_16
SMC_N
AAA_21
AAA_29
ABC2_membrane_3
RsgA_GTPase
AAA_23
AAA_22
MMR_HSR1
nSTAND1
AAA_14
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WMB73785
UniProt:
A0AA50KEA9
LinkDB
All DBs
Position
844226..846259
Genome browser
AA seq
677 aa
AA seq
DB search
MTTALLEISGCYRTFQAGEQQLTVLKDVNLSIGRGEMVAIVGASGSGKSTLMNILGCLDK
PSKGAYFINGQDTSTMDVDELAQLRREHFGFIFQRYHLLGDLTAIGNVEVPAVYAGKERT
VRKDRAEHLLTRLGLGDRLDHKPNQLSGGQQQRVSVARALMNGGDVILADEPTGALDSHS
GEEMMQLLQELHSDGHTIIIVTHDMHVAQYADRIIEIKDGVIISDERSQDKQTAKPQSST
SQTSTSQSSTLQNMAPQNPSGAVAAKDSSRARVASLDRYVEALKMALVAMSTHRLRTFLT
MLGIIIGIASVVSVVALGEGSQQAILKSISSMGTNTIDIRPGSGFGDRRSARVRTLTATD
ANALKNLPYVDSVTPSIGSTATVRFGNKAVSASVNGVGPEFFRVRGYELAQGQFWDDASV
ASLAQDAVIDDNTRKELFPNSAADNNSAIGQVIFLGDLPVRIIGVTQPKESAFGNSDALN
VWVPYTTVSGRMVGKNYLDGITVRLDETVPSNAAEQGIIALLKMRHGTQDFFTINTDTIR
QNIEKTTATMTLLISAIAVISLVVGGIGVMNIMLVSVTERTREIGVRMAVGARQNDILRQ
FLIEAILVCLCGGTLGIALSYLIGVVFAQTGGSFQMIYSTTSIVAAFACSTLIGVLFGFL
PARNAAQLDPVDALARE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacggcattacttgaaatttcaggttgttatcgcacttttcaggcgggtgagcag
caactcactgtgctgaaagatgtgaacttgtcgattggccgtggcgagatggtggcgata
gttggtgcttctggctcgggtaaatcgaccctaatgaacattcttggttgtttagataag
ccgtcaaagggcgcgtattttatcaacggccaagatacctcgactatggacgttgatgag
ttagcacagctgcgccgcgagcactttggttttatctttcagcgttatcatttactgggc
gatttgaccgccataggcaacgtcgaagtgcctgctgtgtatgcgggtaaagaacgcacg
gttcgtaaagacagggccgagcatttgttaacgcgtttaggccttggcgacaggcttgac
cataaacccaatcagctcagtggcggacagcagcagcgggtcagtgtggcgcgcgcttta
atgaatggcggcgatgtgatccttgcggatgaaccaacaggtgcacttgacagtcacagc
ggcgaagaaatgatgcagttgttgcaggagctgcacagcgacggtcataccatcattatc
gtgacccacgatatgcacgtggcccaatatgccgaccgcattatcgaaatcaaagacggc
gtgatcatcagcgatgagcgcagtcaggataaacaaacggctaagccacaaagctcgacg
tcacaaacttcgacgtcgcaaagctcaacgttacaaaatatggcgccacaaaatcctagc
ggtgcagtggcagcaaaagacagctcgcgtgcgcgggtggcttcgttggacagatatgtc
gaagcacttaaaatggcgctggtggcgatgtcgacccacaggttacgtaccttcttgact
atgctcggcattatcataggtatcgcctcagtggtttctgtggtggccttaggtgaaggc
tcgcagcaggccattctcaaaagtatcagttcgatgggaaccaacacgattgatattcgc
cccggttcaggttttggcgatcgacgctcggcgcgggtgcgcaccttaaccgcaacggac
gccaatgcccttaaaaatctgccctatgttgatagcgtgacgccaagcattggctctact
gcaacggttcgttttggtaataaagcggtatcggcatcggtgaatggtgtgggacctgag
tttttccgtgtaagagggtacgagttagcgcagggccaattttgggatgatgccagtgtc
gcatcgctcgcccaagatgcggtgattgatgacaacacccgtaaggagcttttccctaac
agcgctgccgacaataactcggcgatagggcaagtgattttccttggagatttacccgta
cgtatcataggtgtgactcaacccaaagaaagtgcttttggtaacagcgatgcgcttaat
gtatgggtgccttacaccacagtttctggccgtatggtgggtaaaaattatttggatggt
attacagttcgactcgatgaaactgtgccgagtaacgcggcggagcagggcattatcgcg
ctgcttaaaatgcgccacggcacgcaagatttcttcactatcaataccgataccattagg
cagaacatcgaaaaaaccactgcgaccatgaccttactaatctcggctatcgcggtgatt
tcccttgtcgttggcggaattggggtgatgaacattatgttagtgtctgtgactgagcga
acccgtgaaatcggtgttcgtatggccgtgggtgcgcgccagaacgatattttgcgccag
ttccttatcgaagccattttagtgtgtttgtgtggtggcaccttaggcatcgccttgtcc
tacttaattggcgtggtgtttgctcaaacggggggcagtttccaaatgatttattccacc
acctccatcgttgctgcctttgcctgctcgaccttaattggtgtgctatttggtttctta
cccgcccgcaatgcggcgcagttagatcccgttgatgcactagccagagagtaa
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