Shewanella oncorhynchi: RA178_04080
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Entry
RA178_04080 CDS
T09381
Name
(GenBank) two-component system response regulator
KO
K07814
cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
RA178_04080
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Gene cluster
GFIT
Motif
Pfam:
HD_5
Response_reg
HD
Motif
Other DBs
NCBI-ProteinID:
WMB73811
UniProt:
A0AA50KFS0
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Position
894473..895489
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AA seq
338 aa
AA seq
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MEKATILVVDDTPENIDILIGILGDDYKVKVAIDGPRALALVTKSRPDLILLDVMMPGMN
GYEVCKLLKQEPLTSHIPVIFVTALSEIADEAQGFALGAVDYITKPVSAPVVKARVKTHL
ALYDQKRLLEQQVKVRTHELEETRFEIIRRLGRAAEYKDNETGLHVVRMSHYARILAIKL
GLPTTFCDLIFNAAPMHDIGKIGTPDAVLKKPGKLDAQEWEIMQQHAAIGAEIIGEHSDP
LLQMARRIALTHHEKWDGSGYPNGLVGEEIPLEGRITAIADVFDALTSQRPYKQAWTIEA
TMELFENQAGKHFDPKLVEEFKQILPEAIAIRDTYLEN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcaacaatattagtcgtcgatgacacacctgagaatattgatattttgatt
ggtattctaggtgatgattacaaagtcaaagtggcgatcgatgggccaagggcattagcg
ttagtgacaaaatcgcggcctgacttgattctgctcgatgtcatgatgccaggtatgaat
ggctatgaagtctgcaagctgctaaagcaagagccgctgaccagccatattccggtgatc
ttcgtgaccgccttatctgaaattgctgatgaagcccaaggttttgcattgggcgcggtg
gattacattactaagcctgtcagtgcgcctgtcgttaaagcgcgggttaaaacgcatctt
gcgctctatgatcaaaaacgtctacttgaacaacaagttaaagttcgtacccacgaatta
gaagaaacccgtttcgagattatccgtcgtcttggccgtgccgctgaatacaaggacaac
gagacgggtctacatgttgtgcgtatgagccattacgcccgcatattagcgataaagctc
ggcttaccgacgaccttttgtgacttgatttttaatgcggcgcctatgcacgatattggt
aaaatcggtacgcccgatgctgtgctgaaaaagcctgggaaacttgatgcgcaggaatgg
gaaattatgcagcagcacgctgccataggtgcagagattattggtgaacatagcgatccg
ttattgcaaatggcccgtcgtatcgccttaactcaccatgagaagtgggatggttcaggt
taccccaatggcttggttggcgaagaaatcccccttgaagggcgtatcaccgcgattgcg
gatgtgttcgatgcgctgacttcgcaacggccttacaagcaggcttggacgattgaagca
actatggagctatttgaaaatcaagcgggaaaacatttcgatcctaagctggtggaggag
ttcaagcaaatcctgccagaagcaattgccattcgagatacttatttagaaaattga
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