Shewanella oncorhynchi: RA178_04380
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Entry
RA178_04380 CDS
T09381
Name
(GenBank) methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
sog
Shewanella oncorhynchi
Pathway
sog02020
Two-component system
sog02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA178_04380
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RA178_04380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sog02035
]
RA178_04380
Bacterial motility proteins [BR:
sog02035
]
Flagellar system
Chemotaxis proteins
MCPs
RA178_04380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
TarH
HAMP
UPF0242
DUF2985
HAMP_2
NikR_C
DUF948
Motif
Other DBs
NCBI-ProteinID:
WMB73869
UniProt:
A0AA50Q409
LinkDB
All DBs
Position
complement(963854..965479)
Genome browser
AA seq
541 aa
AA seq
DB search
MWLRQFKIGSRLIAAFGLLALVLLLQGIMSLQTMSSMRSTAIEIEDNTLPSLVSLSSINL
NVMRARVFTFRLLLANSTAELNKGLDTLRQIRQSIKTDQKNYEPLISLPGEQELYQEFSG
SLDLYLKHQDEMISKLQANDAAEAKRIMDDVMIVQAEKMTKTLISIGSLNTEYAKEQDQI
TAQAYDESKWLNSIMIVGSLIAAFMVAIFLTRSIVQPMKEAVGISVAVAKGDLTQKISTE
GKDETSQLMQSLAEMQQNLRDTLSHIANSSSQLASAAEELNSVTEDASRGIQQQNDEIQQ
AATAITEMSSAVDEVANTAVLASEASEETARSTELGKKQVDQTVAAIIDMNQDVTQSSQV
VQTLAIQARDIGKVLDVIRAIAEQTNLLALNAAIEAARAGDTGRGFAVVADEVRALAHRT
QSSTREIEDMINKIQHGTETAVQSMQHSSQKAEQALSVARLAGDALNTINRQISTMNNSN
MVIASAAEEQAKVAREVDKNIVNISDLASQSAAGAQQTSASAHELSRLAVELNNLLTRFK
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtggttacgacaatttaagattggctcacgattaattgctgcgtttggattacttgct
cttgtgttgctacttcaaggaatcatgtcattacagacaatgtcatccatgcgctccact
gctatagaaattgaagataataccctaccttcgctagtcagtctgtcgagcatcaacctc
aatgtgatgcgcgctagggtgtttacatttcgcctgttattagcaaattcgactgctgaa
cttaataaaggactcgatacattaaggcaaatccgccagagtattaaaacggatcaaaaa
aactatgagcctttaattagcctgccaggtgagcaggagctctatcaagaatttagtggc
agccttgatctgtatttaaagcatcaagatgagatgatcagcaagctacaggcgaatgat
gcagccgaagctaaacggatcatggatgatgtcatgatagtgcaagccgaaaaaatgaca
aagacgctcattagcattggcagcttgaatactgaatatgcaaaggaacaagatcaaata
actgcacaagcctacgacgagagtaaatggctaaacagcattatgatagtgggctcctta
atcgctgcatttatggtggcaatatttttaactcgcagtatcgtgcagccaatgaaggaa
gctgtaggcatttcagtggcagtcgcaaaaggggatttaacgcagaaaatcagcacagag
ggtaaagatgaaaccagtcaactgatgcaatcattagctgaaatgcagcaaaacctgcgc
gacactttatcccatatagcaaactcctctagccagctcgcctccgcagccgaagaactc
aattcagtcactgaagatgcttcccgcggcatacagcaacaaaatgatgaaatacagcaa
gcggcaacagcgattaccgaaatgagttcggcagtggatgaagtagccaatacggcggtg
ctcgcttcagaagcctctgaagaaaccgcccgcagtaccgaattaggtaaaaaacaggta
gatcagacagtcgcagccattatcgacatgaatcaggatgtgacacaaagttcacaggtt
gttcaaaccttagcgattcaagcgagggatataggtaaagttctcgatgtgatccgcgcc
attgctgagcaaacaaatttactggccttaaacgcagccattgaagcggcgcgagcgggc
gatacaggccgtggttttgcggttgttgctgatgaagttcgcgccctagcccatcgcact
cagtcctcgacccgtgaaattgaagacatgattaacaaaatccagcacggcaccgaaacg
gctgtgcaatcgatgcagcacagcagccaaaaggctgaacaggcactctcagtcgcaaga
ttggcaggggatgcattaaacacgattaatcgccaaatcagtacgatgaataacagcaac
atggtcatcgcaagcgccgccgaagagcaagcgaaagtcgcacgtgaggtcgataaaaac
attgtgaatattagtgatcttgccagccaaagtgctgcgggggcacagcaaaccagtgcc
tcggcacatgaactctcaagactcgccgttgaactgaacaatctactgacgcgatttaaa
gtctag
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