Shewanella oncorhynchi: RA178_05695
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Entry
RA178_05695 CDS
T09381
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sog03400
]
RA178_05695 (radA)
DNA repair and recombination proteins [BR:
sog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RA178_05695 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA_22
GvpD_P-loop
SLFN-g3_helicase
AAA_16
ABC_tran
AAA
RecA
AAA_24
zf-LYAR
Zeta_toxin
nSTAND3
NTPase_1
KdpD
Viral_helicase1
AAA_29
AAA_14
cobW
DZR
Motif
Other DBs
NCBI-ProteinID:
WMB74111
UniProt:
A0AA50KGC2
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All DBs
Position
1260331..1261695
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AA seq
454 aa
AA seq
DB search
MAKNKTAYVCNECGQDFPRWQGQCSACQEWNTITEVRLGAASPGRSTKFVGYAGASSNEV
KTLDQIDLNALPRILSHFGELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCHLAEQM
PALYVTGEESLQQVAMRAHRLGLPTNKLRMLSETSVEQICEVALKELPKVIVVDSIQVMH
MSDVASSPGSVSQVRESASYLTRFAKENGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVMF
EGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEESSGSLVMVV
WEGTRPLLVELQVLVDNSAMSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVNVV
GGVKVTETSADLTLLLAMVSSFRGDILPSDLVAFGEVGLSGEIRPVPNGQERLIEAAKHG
FKRAIVPKANVPKKPPAGMEVVGVSKLSEALEAI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaataaaacggcgtacgtatgtaatgagtgtggacaagactttccccgttgg
caagggcagtgtagcgcttgtcaggaatggaatacgatcactgaggtgaggctcggtgca
gcttcgcctgggcgcagcactaagtttgtcggttatgccggagcaagcagcaatgaagtg
aagacattagatcaaatcgatctcaatgccttaccgcggatcttgagtcattttggcgaa
ttagatcgagtgctcggtggtgggattgtaccaggttctgccattttgataggcggacat
ccaggcgcaggtaagagtacgcttttattgcaaactctgtgtcatctggccgagcaaatg
cctgcactgtatgtcacgggtgaagaatcgttgcagcaggtagcgatgcgcgcccatcgc
cttggtttaccaaccaataaattgcggatgttgtctgaaaccagcgtcgagcaaatttgc
gaagttgcccttaaagaattgcctaaagtcatcgttgttgactcgattcaagtgatgcac
atgagtgatgtggcatcgagccctggcagtgtgtcgcaggtgcgtgaatccgcttcttac
ttaacccgttttgcgaaagaaaatggcattgccgtgatcatggtcggccatgtgaccaaa
gatggcagtttggctgggcccaaggtattggaacattgtatcgactgctctgtgatgttc
gaaggggatagcgatagtcgttaccgcaccttgcgctcccataaaaatcgttttggcgcg
atcaatgaattaggcgtatttgccatgacagagcgcggcttaaaggaagtcgccaatcct
tcggcaatcttcctctctcgtggtgaagaagaatcatctggctcgcttgttatggtggtt
tgggaaggaacgcgacccttgttggtggagctgcaagtgctggtggataactcggccatg
tctaacccgcgccgcgtggctgtgggtatggatgcaaaccgtttggccatgttgcttgcc
gtaatgcaccgccatggtggtttgcagatgtcggatcaggacgtgtttgttaacgtggtg
ggtggcgtgaaagtgactgaaaccagtgccgacttaaccttgctgcttgctatggtatcg
agttttcgcggtgacattttacctagcgatttagttgcctttggtgaggtcgggctgtcc
ggcgaaattcgtcctgtgcccaatgggcaagagcgattaatcgaagccgctaagcatggt
tttaagcgagcaatagtgcccaaggccaatgtgccgaaaaagcctccagctgggatggaa
gtggtgggtgtttctaagttatccgaagcgctagaagcgatttag
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