Shewanella oncorhynchi: RA178_05855
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Entry
RA178_05855 CDS
T09381
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sog03000
]
RA178_05855
Transcription factors [BR:
sog03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RA178_05855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WMB74142
UniProt:
A0AA50KFQ0
LinkDB
All DBs
Position
complement(1299988..1300848)
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AA seq
286 aa
AA seq
DB search
MEPKYISFDKSAKTCIRKQAITEDLSWAHYQNASERLYYQNDAQHTLSMYLDGGYETHRT
DIKADYGAPSKFCLMPQGSESRWQLGQPQQFMHLYFSDEHLKKLAVRVFDKDPRQVRLPE
LTFVDNPRLEALFRHQVAGLDWQTRDHHLMMEQVTDTVLVTLLQSSGFNLSVGPIKGGLA
PKVAKAIKEFIHCHSHRQIYLSELAELAQLSEYHFCRMFKCQFAMTPQEYLLQVRIEKVK
QSLSHSTQSLTEIALNNGFANQSHMGRYFKKLSGMSPGEYQKYHRS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaaatacatcagttttgataaatccgccaaaacctgtattcgtaaacaagcg
attacggaggatttatcttgggctcattatcaaaatgcgagcgagcgtctgtattaccaa
aacgatgcacaacatacgctgagcatgtatctggatggcggctacgaaacccacagaacc
gatatcaaggccgactatggtgcgcccagtaagttttgtcttatgccccaaggtagcgag
agtcgttggcaactgggacaaccgcagcagtttatgcatttgtattttagcgatgaacat
cttaaaaaattggcggtgcgagtctttgataaagatccacgccaagtgcgtttacctgag
ttgacctttgtcgataatccgagattggaggcgctgtttcggcaccaagttgcggggctc
gattggcagacgagggatcaccatctgatgatggaacaagtaaccgacactgtgctggtg
actttgctgcaaagctcaggctttaatttgtcggtggggccaattaagggcggactcgca
cctaaagtggccaaagcgatcaaagagtttattcattgccattcccatcggcaaatttac
ttgtctgagttggccgagcttgcccaacttagcgagtaccatttttgtcgcatgtttaaa
tgccaatttgcgatgacgccgcaggagtatttgctgcaagtgcgcattgaaaaggtcaaa
caaagcttgagtcattcaacgcaatcattgactgagatcgccctcaataatggctttgcc
aatcaaagtcatatggggcgttactttaaaaaactcagcggcatgtcaccgggcgaatat
caaaaataccatagaagctaa
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