Shewanella oncorhynchi: RA178_05865
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Entry
RA178_05865 CDS
T09381
Name
(GenBank) helix-turn-helix transcriptional regulator
Organism
sog
Shewanella oncorhynchi
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
WMB74144
UniProt:
A0AA50KFB1
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Position
complement(1302029..1302796)
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AA seq
255 aa
AA seq
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MAFILPEQLFNPDLLDNLVIGIAADMGEHDSGMHYHRKAQLLYAPAGCMTFTLTQAQVVL
PPTRAAWLPAGVEHSVRMHNVVAYRSLYFEPETVSSLPDKVTIFHVNPLLKALIDTMSFW
PWDKPRSSQHNAFLLLCEELGNATEENLALPLPQDKRLTTWLAQLQQHQKPPANLKDMAV
EIGASERTISRIFSAQTGMAYQAWRQQWRLLAAIEQLTTGTSVAQVGFNLQFSSDSAFIS
FFKQYTGTTPAQYFK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcctttattctacccgaacaactatttaatccagatctgctggataatctggttatt
ggcattgccgccgatatgggcgaacacgattcgggaatgcattaccacaggaaggcacaa
ctgctttatgctccagcaggatgcatgacattcaccctaacccaggctcaagtggtatta
ccgccgacgcgagccgcttggctgccagcaggtgtcgagcacagtgtcagaatgcataat
gtcgtcgcctatcgctcactctactttgagccagaaaccgtcagctcattgcccgataag
gtcactattttccatgtaaacccactactcaaagccttaatcgacactatgtcgttttgg
ccttgggacaaaccaagaagcagtcaacacaatgcctttttgctgctctgcgaagaattg
ggcaatgccacggaagaaaatctggctttacccctcccacaggataaacgtttaacaacc
tggcttgcgcaactacagcaacatcagaaaccgccagccaatcttaaggatatggcagta
gaaatcggagccagtgaacgcacaattagccgcatttttagcgcacaaacgggaatggct
tatcaagcctggcgccagcaatggcgattacttgcggccatagaacaattaacaacggga
acctcggtggcgcaggtgggctttaatttacaattttccagcgacagtgcctttatcagc
ttttttaagcaatataccggcactactccggcacaatatttcaaataa
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