Shewanella oncorhynchi: RA178_05940
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Entry
RA178_05940 CDS
T09381
Symbol
ribBA
Name
(GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00740
Riboflavin metabolism
sog00790
Folate biosynthesis
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01240
Biosynthesis of cofactors
Module
sog_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
RA178_05940 (ribBA)
00790 Folate biosynthesis
RA178_05940 (ribBA)
Enzymes [BR:
sog01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
RA178_05940 (ribBA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
RA178_05940 (ribBA)
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Caud_bapl16_1st
Motif
Other DBs
NCBI-ProteinID:
WMB74159
UniProt:
A0AA50KFC0
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All DBs
Position
1320770..1321873
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AA seq
367 aa
AA seq
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MALHSIEEIIEDIRQGKMVILMDDEDRENEGDLIMAAEMVTPEAINFMAKYGRGLICQTM
TKARCQQLNLPLMVTNNNAQFSTNFTVSIEAAEGVTTGISAHDRAVTVKAAVAKEAKASD
LVQPGHIFPLMAQDGGVLTRAGHTEAGCDLARLAGLEPSGVIVEILNEDGTMARRPDLEI
FSELHGIKIGTIAALIEYRNTKETTVVREAKCKLPTRFGEFDMVTFRDTIDNQLHFALVK
GEVKEDCLVRVHLQNTFNDLLHSERDQQRSWPLEKAMERISAEGGVLVLLGNQEHPCEIL
SKVKAFEAEDQGQAPASAKWQGTSRRVGVGSQILASLGVTKMRLLSSPKRYHSLSGFGLE
VIEYVAD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcacagtatagaagagatcatcgaagatattcgtcaaggcaaaatggttatt
ttgatggatgacgaagacagagaaaacgaaggtgatttgatcatggcggccgaaatggtc
acgccagaagcgattaactttatggcgaaatatggccgtgggctcatttgccagaccatg
actaaagcccgttgccagcagttaaatctacccttaatggtgacgaataataacgcccag
ttctcgactaactttacggtttctattgaagcggcggagggtgtgactaccggtatttcg
gcccacgatcgcgctgtaacggtgaaagcggctgtggctaaagaggctaaagcgtctgat
ttagtgcaaccagggcacatcttcccgttaatggcacaggacggcggcgtattaacccgc
gcaggccacactgaagctggctgtgatttagcccgtcttgcgggacttgagccatcgggc
gttatcgttgagattttgaacgaagacggcactatggcacgtcgcccagatttggagatt
ttctccgagttgcatggcatcaaaatcggcactatcgcggctttaatcgagtatcgcaat
accaaagaaaccacggttgtgcgtgaagctaaatgcaaattaccgacccgttttggtgag
ttcgacatggtgaccttcagagacactatcgacaatcaactgcactttgccttagtcaaa
ggtgaggtgaaagaagattgtttggtgcgcgtgcatttgcaaaataccttcaacgattta
ctccactcagagcgcgatcagcaacgcagctggccactcgaaaaggcgatggagcgtatt
tctgcagaaggtggtgtattggttttactcgggaatcaagaacatccctgtgaaatcctc
tctaaggtgaaagcctttgaagctgaagatcaaggccaagcgcctgcatctgcaaaatgg
caggggacgtcgcgtcgtgtgggtgtgggttcgcaaattctcgctagccttggcgtgact
aagatgcgtctgctcagctcgcctaaacgctaccattcactttcaggctttggccttgaa
gtgattgagtatgtggcggactga
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