Shewanella oncorhynchi: RA178_05965
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Entry
RA178_05965 CDS
T09381
Symbol
recN
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sog03400
]
RA178_05965 (recN)
DNA repair and recombination proteins [BR:
sog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RA178_05965 (recN)
TLS (translesion DNA synthesis) factors
Other SOS response factors
RA178_05965 (recN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
DUF2937
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WMB74163
UniProt:
A0AA50KFZ4
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Position
complement(1324598..1326256)
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AA seq
552 aa
AA seq
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MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGAN
KTEVSARFSLDDIPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLL
GQLLIGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVAASFQRCKQIEADLKHLEASQ
HERIARKQLVQYQVEELDEFDLKVDEFDEIEQEHKRLANGTELIDTCQASLDILTEGEEN
NIESLLNRVVSLAEDLQSYDPALSNINTMLNDALIQVQESAGELQHYLSKLELDPTHFAY
LEERLSKAMQLARKHHVSPNKLAEHHLALKAELSTLDSDESKLEEIQLQVDASRAAYLSN
AQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFHPEQMSANGSDNIEFMVTTNP
GQPLQPISKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVLCVTHLPQVAGNGHQHMFVDKFNKAGSTETTMKSLDREQRIQELARLLGGDTIT
SNTLANARELLQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgctttgccaactcagcattaataacttcgcaatcgtccgttttttagagctggatttt
cgccccggtatgaccagcatcacaggtgaaaccggtgcgggtaaatcgatcgccatcgat
gcgctaggcctgtgcctaggcaatcgcgccgatgccagcagtgttcgcccaggagccaat
aaaaccgaagtcagcgcccgcttttccttggacgatattccactggcaaaacgttggtta
gaagataacgatcttgaactcgatgatgagtgtatcctacgtcgaactattggtagcgat
ggccgttcacgcgcctacatcaatggtaatccagtgccgctgacgcagctcaaattactg
ggtcagttgcttatcggtattcacggtcaacatgcgcaccatgcgatgttgaagagtgaa
caccaacttaccttgctcgacagttatgccaaccacagattgcttatcgatacggttgcc
gccagttttcaacgctgcaaacaaattgaggccgatctaaagcacctcgaagcctcccaa
catgaacgtattgcccgtaagcaattagtgcaatatcaagtagaagaactcgatgagttt
gatcttaaagtcgatgagttcgatgaaattgagcaagagcacaaacgtctggccaatggc
actgagttgattgatacctgtcaggcgagcttagatatactcactgaaggcgaagagaac
aatatagagtcgctgcttaatcgagtcgtttccctcgccgaagatctgcaaagctacgat
cctgcattaagcaatatcaacactatgctcaatgatgccttaatccaagtgcaagaaagt
gcaggcgaattacagcactatttgagtaagcttgaactcgatccaacccactttgcctat
ttagaagaacggctatcaaaagccatgcaactggcgcgtaaacaccatgtcagcccaaat
aaactagccgaacatcatttggcattaaaggcagagctgagcaccttagacagtgacgaa
agtaaacttgaagaaattcaactacaggtcgatgctagcagagccgcttaccttagcaac
gcacaaaaactcagccaaagccgggctagatatgccaaagaactcgacaaactcgtgact
cagtcaatccacgaactgaatatgccaaagggtaaatttactatcgaagtcaatttccac
ccagagcaaatgtcagccaacggcagtgataatatcgaatttatggtcaccactaaccct
ggccaacctttacaaccgatttcgaaagtcgcatctggcggtgaactttcacggataggc
ttagggatccaagtcattaccgcgaagaaagttgccacgccgacattgattttcgatgag
gtggatgtcgggatttccggtcccaccgccgcagtagtaggccgcatgttacgcagctta
ggggaatcgacccaagtactgtgcgtgactcacttgccgcaagttgcgggcaatggtcat
caacacatgttcgtcgataaatttaataaggcaggcagtactgagaccacaatgaaatcg
ctcgatcgtgagcagcgtatccaagagcttgcaagactgttaggtggcgatactatcacc
agcaataccctagcaaacgcaagggaactgctgcaatag
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