Shewanella oncorhynchi: RA178_06100
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Entry
RA178_06100 CDS
T09381
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sog
Shewanella oncorhynchi
Pathway
sog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RA178_06100 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sog03400
]
RA178_06100 (mutS)
DNA repair and recombination proteins [BR:
sog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RA178_06100 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
MutS_C
DUF4595
Motif
Other DBs
NCBI-ProteinID:
WMB74190
UniProt:
A0AA50KEZ7
LinkDB
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Position
complement(1362096..1364666)
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AA seq
856 aa
AA seq
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MNVIDTDDLEKHTPMMRQYLTMKAEHHDMLLFYRMGDFYELFYDDAKRASELLGISLTAR
GKSGGDPIPMAGLPYHAVEGYLAKLVQIGQSVAICEQIGDPATSKGPVERKVVRIVTPGT
LTDEALLQERQDNLLAAVYQGKVGFGYATLDVSSGRFVIAELDTRESLEAELQRTNPVEI
LYSEDFGELGLLNGFKGKRRRPEWEFDYDTSIKLLLAQFGTKDLHGFGIADARLSLQAAG
CLMQYVKDTQRTALPHINAIIRFNQTDSIVLDAATRRNLELTQNLAGGRDNTLAAVLDNT
ATPMGSRMLQRWIHQPLRDPKQIKARQQAVTELLDTAAHEGLHEQLKALGDIERIMARLA
LRTARPRDFARLRQALGLLPELQQSLSTLSAPHTTQLRQHLGEFPAEQALLERAIVDNPP
MLIRDGGVIREGYNSELDEWRGLSEGASDYLVQLEAREKERTGINTLKVGYNRVHGYYIE
VSRLQSSQVPLNYQRRQTLKNMERYITPELKEYEEKVLSSQGKALALEKQLWEQLFDLIL
PKLHELQAFARAAAELDVLSNFAERAETLGYTCPELSQDIGVQIDAGRHPVVERVSQTPF
IANPVTLHNQRRMLIVTGPNMGGKSTYMRQVALITLMAHIGCFVPADRALIGPIDRIFTR
IGASDDLASGRSTFMVEMTETANILHNATASSLVLMDEIGRGTSTYDGLSLAWSAAEYLA
QQVGAMTLFATHYFELTQLPDLMAGVYNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVA
ALAGVPNKVIKAAKHKLQQLESRDHQPEGTRTPIQSLLALPEPVENPALTKLSSINPDNL
TPKQALDLLYELKRLS
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaattgataccgatgatttagaaaaacatactcctatgatgcgtcagtacttg
acgatgaaagcagaacatcacgatatgttgctgttttatcgcatgggtgacttctacgag
ttgttttatgacgatgctaaacgcgcttctgagctattaggcatttcactcactgcgcgc
ggtaaaagtggtggcgatcctattccgatggcgggacttccttaccatgctgtggaaggc
tatcttgcaaaattagttcaaattggtcaatcagttgcgatttgcgaacagattggcgat
cccgctacatctaaagggcccgtagaacgtaaagtggtgcgaattgtcacaccaggcacc
ttaaccgacgaagcgttgctacaagaacgccaagacaatctgttagccgcggtttatcaa
ggtaaagtcggttttggttatgccacattagatgtttcatccggacgttttgtgattgca
gagctcgacacgcgagagtcattagaagcggaattgcaacgcactaatcccgttgaaatc
ctctacagtgaagactttggcgaactaggtctacttaacggttttaaaggtaaacgtcgt
cgccctgaatgggaatttgattacgatacgagtatcaagttactactggcccagttcggc
actaaagacttacatggttttggtatcgcagatgcacgtttatcactgcaagctgcgggt
tgcttgatgcaatatgtcaaagacacacagcgcacggcactgccccatatcaatgccatt
atccgcttcaatcaaaccgatagcatagtactcgatgcggcaactcgccgaaatctagaa
ctcactcaaaaccttgccggtggccgcgataataccttagccgcagtattagataacacg
gcaacgcctatgggcagtcgtatgttacaacgctggatccatcagcctctgcgagatcct
aagcaaattaaggcgcgccaacaggcggtgactgaactcctcgataccgcagcccacgaa
ggtttgcatgagcagttaaaggcacttggcgatatcgaacgtatcatggcaaggttagcc
ctgcgcactgcccgtccaagggactttgcacgtttacgtcaagctctgggcttattgcct
gaattacaacagagtttaagtacactgagcgcgccgcacacgactcaattgcgtcaacac
ttaggcgagttccccgctgagcaagccctacttgagcgcgcgatagtcgataatccacct
atgcttatccgcgatggcggggtgatccgtgaaggctacaacagcgaactagatgaatgg
cgcggtctgagcgaaggagcgagtgattacttagtacaacttgaagccagagaaaaagaa
cgtactggcatcaatacacttaaagtcggctataaccgcgtacacggctattacatcgaa
gtaagccgcctgcaatcctcacaagtaccgctcaattatcaacgacgccaaacacttaag
aatatggagcgttatatcacgcccgaacttaaggaatacgaagaaaaagtcctctcgagc
caaggtaaagcgctggcactcgaaaagcagttatgggaacagttattcgatcttattctg
ccgaaattacatgaattacaggcttttgctagagcagcggctgagcttgatgtactgagt
aactttgccgagcgtgccgaaaccttaggctacacttgtccagagctgagccaagatatc
ggcgtacaaatagacgcaggtcgccatccagtggtggagcgtgttagccaaacgccgttt
atcgctaacccagtgaccttgcacaatcaaagacgtatgttgattgtgactggacctaac
atgggcggtaaatcgacctatatgcgtcaagtcgccttgattacgctgatggcccatatt
ggttgttttgtgccagcagatcgcgccctgattggcccgattgatcgtatatttacccgt
attggcgcatcagacgatctggcctctggccgctcaacctttatggtagaaatgactgaa
actgccaacattctgcacaatgccactgccagtagtttagtgttaatggatgaaatcggc
cgtggaacatccacctatgatggtttatcgctagcttggtcggcagcagagtatttagcc
cagcaagtcggggctatgaccctattcgccacccattattttgagctaactcaattacct
gacttaatggcaggtgtttacaatgtgcaccttgatgccatagagcacgatgataccatc
gcctttatgcatgcagtacaagaaggcgccgccagtaaaagctacggcttacaagttgcg
gcgcttgccggcgtgccaaacaaagtgattaaagcagcgaaacataaattgcagcaattg
gagagtcgcgatcaccaaccagaaggaacgaggacgcccattcaaagcttactcgcttta
cctgaaccggttgaaaatccagctttgactaaattaagtagcattaatcccgataactta
acgccaaaacaggcgcttgatttgctctatgaactgaaacgcttgagctag
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