Shewanella oncorhynchi: RA178_06380
Help
Entry
RA178_06380 CDS
T09381
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RA178_06380
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sog01007
]
RA178_06380
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sog03016
]
RA178_06380
Enzymes [BR:
sog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
RA178_06380
Amino acid related enzymes [BR:
sog01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RA178_06380
Transfer RNA biogenesis [BR:
sog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RA178_06380
Prokaryotic type
RA178_06380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
WMB74237
UniProt:
A0AA50KGM6
LinkDB
All DBs
Position
complement(1413946..1416822)
Genome browser
AA seq
958 aa
AA seq
DB search
MEKTYDPQSIEQTLYQNWEEQGYFKPHGDESKGNYCIMIPPPNVTGSLHMGHAFQDTIMD
TLTRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKNRHDLGRDAFMDKVWEWKAQ
SGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQEVFVRLYEDELIYRGKRLVNWDPKLH
TAISDLEVESKEKQGHMWHLRYPLADGELTADGKDYLEVATTRPETMLGDSAVAVHPDDE
RYQALVGKFILLPIVNRRIPIVADDYVDMAFGTGCVKITPAHDFNDYEVGKRHNLPMFNV
LTLDAAIRVSAEVVNSDGTFNKTLDGSLPERFAGLDRFKARDAIVAEFDTLGLLEKIAPH
ALKVPYGDRSGVVIEPMLTDQWYVAVAPMAKTAIEAVENGSIKFVPQQYENMYFSWMRDI
QDWCISRQLWWGHRIPAWYDENGKVYVGRNEAEVRAKHNIADSMTLRQDEDVLDTWFSSA
LWTFSTLGWPDNLEDLKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKT
VYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIGLEDLVEKRTGNMMQPQLAAKIEKSTRK
EFADGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEDQD
CGPGSPEYKGGEMELSLADRWIIGLFNQTVKTFDDHMTNYRFDLAANTLYEFTWNQFCDW
YLELTKPVLQNGSETQMRGTRHTLVTVLEAMQRLMHPMMPYITETIWQRVKPLAGVAGDT
IMLAPFPTFDAAKVDSAAMADLEWVKQVIVAVRNIRAELNIAPSKPLNALLRGVSAQDKA
RVEANQTFFTTLARLESMTILADGETAPMSTTGLIGEMELLIPMAGLIDVAAEMARIDKQ
LEKLGQEIARIEGKLSNQGFVAKAPADVIDKERAKMADLKRDMDKLNEQKSEFAKLEA
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacatacgatccgcagtccatcgagcaaacgctttaccaaaattgggaagag
caaggttacttcaagccacacggcgatgaatccaaaggcaattattgcattatgatcccg
ccacctaacgtgacgggcagcttgcacatgggccacgccttccaagacaccattatggat
accttaacccgttaccaacggatgaaaggcaaaaataccctatggcaagtcggtactgac
catgcgggtatcgccacccaaatgttggttgagcgtaagcttgaagccgaagaaggcaaa
aatcgccatgacctaggtcgcgatgcctttatggataaagtgtgggaatggaaagcgcaa
tcgggcggcactatcactaagcagctacgtcgtatgggcgcttctgtagattgggaccgc
gagcgtttcactatggacgaaggcttgtccaaggccgtgcaagaagtgtttgtgcgtctg
tacgaagacgagttgatttatcgcggtaagcgtttggtcaactgggatccaaagctgcac
acagctatctctgatttagaagtggaaagcaaagaaaaacagggccacatgtggcatctg
cgttatccactggccgacggtgaactgacagccgatggtaaagactatttagaagtcgct
accacgcgcccagaaaccatgctcggcgacagtgcggttgcagtgcatcccgatgatgaa
cgctatcaagcgctggtcggtaagtttattctgttgccgattgttaaccgccgcattcct
atcgtggccgacgattacgtcgacatggcctttggtacaggttgcgtgaagatcaccccg
gcccatgactttaacgactatgaagtcggtaaacgtcacaacctacccatgttcaacgtg
ctgaccttagatgccgccattcgcgtgagcgccgaagtggtgaactctgacggtaccttt
aacaaaacgctcgatggcagcctgcctgaacgctttgccggacttgatcgttttaaagcc
cgcgatgctatcgtcgctgaatttgacactttagggctgctcgaaaaaatcgcgcctcac
gccttgaaagtgccttacggcgatcgctccggtgtggttatcgagccgatgctgaccgac
caatggtatgtagctgttgcgccaatggcgaaaaccgctatcgaagccgttgaaaatggc
agcattaaatttgtgccgcagcaatacgagaacatgtacttctcgtggatgcgcgacatt
caagactggtgtatttcgcgtcaattgtggtggggtcaccgcatcccagcttggtacgac
gaaaacggcaaagtctatgtcggccgcaacgaagccgaggtacgtgctaagcacaatatt
gccgactcaatgacattacgccaagacgaagacgtactggacacttggttcagctcagcc
ctgtggactttctcgaccttaggttggcctgacaatttagaagatttaaaaaccttccac
ccaaccgacgtgttggtgacaggttttgacatcatcttcttctgggttgcccgtatgatc
atgatgaccatgcacttcatcaaagatgaagacggtaaaccacaagtcccgttcaaaacc
gtctacgtaaccggtcttatccgcgatgaagcgggtaacaagatgtcaaaatctaagggc
aacgtactcgatccattagacatgatagacggtatcggccttgaagatctcgttgaaaaa
cgtaccggtaatatgatgcagccacaactggccgccaagattgaaaagagcactcgcaaa
gagtttgctgacggtatagaagcacacggcactgatgcactgcgctttacgcttgcggca
atggcatcaacgggtcgtgacatcaactgggatatgaagcgcttagacggttaccgtagc
ttctgtaacaagttatggaacgcctcacgctacgtgctgatgaacacagaagatcaagat
tgcggccctggctcaccagagtacaaaggtggcgagatggagctgtcgttagccgatcgc
tggattattggcttgttcaatcaaaccgttaagacctttgacgatcacatgacgaactat
cgtttcgacttagcggccaataccctgtatgagttcacttggaaccagttctgtgactgg
tacttagagttaaccaaaccggtattgcaaaacggcagcgaaacgcaaatgcgcggcacc
cgtcacaccttagtgacagtgcttgaagcgatgcaacgcctgatgcaccctatgatgccg
tatatcactgaaaccatttggcagcgcgttaaaccgttagccggtgtcgcaggtgatacc
attatgcttgcgccattcccaacatttgatgccgctaaagtcgatagcgcagcaatggcc
gatttagaatgggttaagcaagtgatcgtagcggtgcgtaacattcgcgccgaactgaac
attgccccatctaaaccgctaaatgccctacttcgtggtgttagcgcgcaggataaagcc
cgtgtagaagcgaaccaaaccttcttcactacgcttgcccgcttagaaagcatgaccatt
ttagccgatggcgaaactgcgcctatgtcgaccacaggtttgattggcgaaatggagctg
ctgatccctatggcaggcttaatcgatgtcgccgccgaaatggcccgtatcgacaaacag
cttgaaaagctcggccaagagatagctcgcatcgaaggaaaattgtcgaaccaaggcttc
gtggcaaaagcccctgccgacgttatcgacaaagagcgcgccaagatggccgatctcaag
cgagatatggacaaactcaatgaacaaaaatctgagttcgctaagttagaagcttaa
DBGET
integrated database retrieval system
