Shewanella oncorhynchi: RA178_06510
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Entry
RA178_06510 CDS
T09381
Name
(GenBank) glycosyl hydrolase family 18 protein
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00520
Amino sugar and nucleotide sugar metabolism
sog01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
RA178_06510
Enzymes [BR:
sog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
RA178_06510
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
ChitinaseA_N
CBM_5_12
PKD_4
Sde0182_C
PKD
Y_Y_Y
Motif
Other DBs
NCBI-ProteinID:
WMB74262
UniProt:
A0AA50KFY5
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Position
1447306..1449912
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AA seq
868 aa
AA seq
DB search
MFKTQISTSALLVASALASTISASVFAAAPGKPTLGWGETKFAIIEVNQAATAYNQLVTV
KDAADVSVSWNLWSGDVGNRAQVLLNGNVVWEGPSGASGTANFKVNKGGRYQMQVQLCNS
DGCTASDAKQILVADTDGSHLVPLNAPLKENNRPYANKSGKVVGGYFVEWGVYGRKFPVD
KIPAQNLTHILYGFTPICGGDGINDSLKEIEGSFEALQRACSGRGDFKVAIHDPWAAIQI
PQAGVSEHSDPYKGNFGQLMALKQAHPDLKILPSVGGWTLSDPFFFFGDKTKRDIFVASV
KEFLQTWKFFDGVDIDWEFPGGNGANPNLGNANDGETYVTLMRELRTMLDELSAETGRTY
ELTSAISAGDDKIQKVDYQAAQQYMDYIFLMSYDFNGGWTNTELGHQTNLYEASWDPNTR
YTTANGVNALLGQGVTPGKIVVGAAMYGRGWTGVNGYSGNNPFTGTATGKVKGTWEAGVV
DYRQIANDYMGSGWTYSYDETAEAPSLFKASTGDLITFDDARSVKAKGQYVLANQLGGLF
AWEIDADNGDILNAMHEGLGHGEGTTPPVNKAPIANAGADVNVTGPADVVLNGSGSRDPE
NEALTYLWTQVSGPTIAIANADMANAAIQLAATQTDVAYSFSLKVIDPEGLSATDSVTVT
NKADTPNQAPVVSVAATATVEAGKTVSIVASASDADGDALTYAWTVPAGVSVTGQNSATL
VVTGPNVTEATSYGLSVLVSDGALDASASTNLTVTPKVIGGGCDATDPNAGNYPAWQTSV
VYNTGDTVSHSQLVWKAKYWTQGNTPSRTADQWQLLSQVDLGWDASVVYNGGQTTRYNGR
VWKASYWTKGDVPGVAAVWVDIGAATCQ
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagactcaaatttcaacatcagccttgctagtggcatcagcgctggcatctacc
atcagtgccagcgtttttgcagctgcacccggtaaaccgactttaggttggggcgaaact
aagttcgctattattgaagtgaatcaagcggctaccgcttacaatcaattagttactgtg
aaagatgccgccgatgtctccgtcagttggaacctttggagtggcgatgtgggcaataga
gcccaagtgttgctcaacggcaatgtggtttgggaaggcccatctggcgcgtcgggaacc
gctaactttaaggtgaacaagggcggccgttatcagatgcaagtacaactgtgtaacagc
gatggctgtacggcgagtgatgctaaacaaatcctcgtggctgataccgacggcagccat
ttagtgccactcaatgctcccctaaaagaaaacaaccgtccctatgcgaataaatcaggc
aaagtggtgggaggttactttgtcgaatggggcgtatacggtcgtaaattcccggtcgat
aagatacctgcgcaaaacttaacccatattttatatggctttaccccaatttgtggtggt
gatggaatcaatgatagcttgaaagaaatcgaaggcagtttcgaagcgttgcaacgtgcc
tgtagtggtcgtggtgattttaaagttgcgattcacgatccttgggcggcgattcaaata
ccgcaggcgggagtgagtgagcattcagatccttacaaaggtaactttggtcaattgatg
gcacttaagcaagcacatccagatttgaagattttaccttcggtcggtggttggaccctc
tcggatcccttctttttcttcggtgataaaaccaagcgcgatatctttgtcgcttcggtg
aaagagtttctacagacatggaaattcttcgatggcgtggatatcgactgggaatttcca
ggggggaatggcgctaacccaaatttaggtaatgccaatgacggtgaaacctatgtgact
ctgatgcgtgaactgcggacgatgcttgatgaactaagcgccgaaacgggtcgtacctat
gagctgacctctgctattagcgcaggtgacgataaaattcaaaaagtcgattatcaggct
gctcagcagtacatggattacatcttcttgatgagttacgactttaatggtggttggact
aatactgaactcggccatcaaaccaatctgtatgaagcgagttgggatcctaatactcgt
tacaccaccgctaatggcgttaatgcgctgttaggccaaggtgtgaccccagggaaaatt
gtggtcggtgccgctatgtatggccgcggctggacaggtgtgaatggctacagtggtaat
aatcctttcacggggacggcaacgggcaaagtaaaaggtacttgggaagctggtgtggtg
gattatcgtcagatagcgaacgattacatgggaagtggttggacttacagctatgacgaa
acggccgaggcgccatctttgttcaaggcatctacgggcgatttaatcactttcgatgat
gcgcgttccgttaaagccaagggccaatatgtgcttgccaatcagctaggtggtttattt
gcatgggaaattgatgccgataacggcgatattctaaatgcgatgcacgaaggtttaggt
catggcgaaggaactacgccaccggtgaataaagcgccgattgccaatgcgggtgcggat
gtgaatgtcacaggtcccgccgatgtggtgctcaatggtagcggatcgcgcgatcctgaa
aatgaggcgctgacgtatctttggactcaagtgtctggcccaacgattgccatcgcaaac
gccgatatggcgaatgcggcgattcaattggctgcaacgcaaactgatgttgcctatagt
tttagcctcaaagtgattgatcctgaagggctatctgccacagattcagtgacagtgacc
aataaggcggatactccgaaccaagctcccgtggtgagtgtagctgccactgccacagtg
gaagcgggtaaaactgttagcatagtggcgagtgcctctgatgccgacggtgatgcctta
acttacgcttggactgtgcccgctggcgtgtcggtaaccggacaaaatagtgccacctta
gtggtcactgggcctaatgtcaccgaagcgaccagctatggtttgagcgtgctggtttcc
gatggtgccttggatgcgagcgcatcgacgaatctcaccgtgacgccaaaagtaatcggt
ggtggttgtgatgcaaccgatcctaatgccggtaactatcctgcttggcaaaccagtgtg
gtgtacaacacgggcgatactgtgagccacagtcagttggtatggaaagcgaagtactgg
acgcagggcaatacgccatctcgcactgctgatcaatggcagttactcagccaagttgat
ctcggttgggatgctagtgtggtgtataacggcggtcaaactactcgctataacggtcgt
gtatggaaggcgagctactggactaaaggtgatgtaccgggtgttgcagcagtatgggtt
gatattggcgcggcaacctgccagtaa
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