Shewanella oncorhynchi: RA178_06885
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Entry
RA178_06885 CDS
T09381
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_06885
Transporters [BR:
sog02000
]
Other transporters
Pores ion channels [TC:
1
]
RA178_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
Motif
Other DBs
NCBI-ProteinID:
WMB74329
UniProt:
A0AA50KG73
LinkDB
All DBs
Position
complement(1512792..1513382)
Genome browser
AA seq
196 aa
AA seq
DB search
MKNSQSRWIQLALLLLSLSLTSQVFAWSDTDRDGVPDIKDACPNTEPNTPVMANGCVEEA
AVEMTASPVCDMSHSNAELNTDCHNISAAMVYFEFAIAEVDFSQWKTLALVKAFLEKNDV
ELTLVGHTDIVGTPEFNYQLSLQRAQNVKRILVEDYGFNPNRFTVIGKGISEPVADNRSS
EGRSLNRRVEFIVNNK
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaactcccaatctcgatggattcagctagcgcttttgctattaagtttaagccta
acatcacaggtatttgcttggtctgacactgaccgagatggagtgccagatatcaaagat
gcctgtcctaacacagagccaaatacacctgttatggctaatggttgtgtggaagaagcc
gctgtggaaatgactgcatcaccagtttgcgatatgagtcattcaaatgctgagttaaac
acagattgtcataatatttctgcagctatggtgtattttgaatttgccattgctgaggtt
gacttttctcaatggaaaactttagccttagtaaaagcattcttagaaaaaaatgatgtt
gaattaaccttagtaggtcacacagatatcgttggtacaccagagtttaattatcaacta
tcacttcaacgggctcaaaatgtaaaacgtattttggttgaagactatggctttaatcca
aatcgctttaccgtaataggtaaaggtatatctgaacctgtagcggacaaccgttctagc
gaagggcgcagtttaaatcgacgagtagaatttatcgtcaataataaatag
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