Shewanella oncorhynchi: RA178_07055
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Entry
RA178_07055 CDS
T09381
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00190
Oxidative phosphorylation
sog01100
Metabolic pathways
sog02020
Two-component system
Module
sog_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
RA178_07055 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA178_07055 (cydB)
Enzymes [BR:
sog01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
RA178_07055 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
WMB74361
UniProt:
A0AA50Q7L9
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Position
1554750..1555889
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AA seq
379 aa
AA seq
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MFDYEILRVIWWALIGVLFIGFAVTDGFDMGVGALLPIIGKDDTERRIMVNTIAPHWDGN
QVWLITAGGALFAAWPMVYAVSFSGFYVAMMLVLFALYMRPVGFDYRSKIENPKWRKSWD
WALFAGGFVPPLIIGVAFGNLLQGVPFEFDEFLRATYHGGLFGLLNPFGLLAGLVSVSMF
MMQGASWLQMKTDSELRVRAAKATQFFALLVAVLFAAAGVWLANGIDGYVVTSVLDHNAV
SNPAMKTVAIEAGAWLANYDKYPITMLFPILGVALPLLVILVSRFNRSGFAFLFSSLTVA
MVILTCGAAMFPFVMPSSLNPNVSLTMWDATASKMTLGVMTAAAAIFVPIVLSYTVWTYY
KMFGRIGRKHIEDNKASLY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatgaaatattaagagttatctggtgggctctgatcggcgtactgttcatc
ggatttgcggttactgatggttttgacatgggtgtcggtgcgttactgccaattataggc
aaagacgatactgagcgccgtatcatggttaacactattgctccccattgggacggcaac
caagtgtggttaatcacagcaggcggtgcgttatttgccgcttggcctatggtgtatgca
gtgtctttctctggcttctatgtcgccatgatgttagtgctgtttgccctctacatgcgt
ccagtcggattcgattatcgttctaaaatcgaaaatccaaagtggcgtaagtcatgggat
tgggccttgtttgccggtggttttgtgccaccgctgatcataggcgtggcctttggtaac
ttgttgcaaggtgtgccttttgaattcgacgagttcctacgtgcgacttatcacggtggt
ctgttcggcctgttgaatcctttcggtttgctggcaggtcttgtgagcgtgagcatgttt
atgatgcaaggcgcttcttggctacaaatgaagactgacagtgagctgcgtgttcgtgct
gcgaaagccacgcaattcttcgcattgttagtggctgtgttgtttgctgctgcgggtgtg
tggttagccaatggtattgatggttatgtagtgacttcagtactggaccataatgcggtt
tctaacccagccatgaaaaccgtcgcaattgaagcgggtgcttggcttgccaactatgac
aaataccccatcactatgctgttccctatcttaggtgtggcattgcctctactagtgatt
ttggttagccgctttaaccgttcaggttttgcgttcctatttagctcactcactgtggct
atggtgattttgacttgcggtgcagcaatgttcccattcgtcatgccatcatcacttaac
cctaacgtcagtttgactatgtgggatgcaacagccagtaaaatgaccttaggtgttatg
actgctgctgccgcgattttcgtacctatagtgttgagctacactgtctggacttactac
aagatgtttggtcgtatcggccgtaagcatattgaagataacaaagcctcactctattag
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