Shewanella oncorhynchi: RA178_07325
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Entry
RA178_07325 CDS
T09381
Symbol
fliF
Name
(GenBank) flagellar basal-body MS-ring/collar protein FliF
KO
K02409
flagellar M-ring protein FliF
Organism
sog
Shewanella oncorhynchi
Pathway
sog02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RA178_07325 (fliF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sog02044
]
RA178_07325 (fliF)
02035 Bacterial motility proteins [BR:
sog02035
]
RA178_07325 (fliF)
Secretion system [BR:
sog02044
]
Type III secretion system
Flagellar export apparatus
RA178_07325 (fliF)
Bacterial motility proteins [BR:
sog02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
RA178_07325 (fliF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
Motif
Other DBs
NCBI-ProteinID:
WMB75213
UniProt:
A0AA50KHX0
LinkDB
All DBs
Position
1611451..1613139
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AA seq
562 aa
AA seq
DB search
MIVGSNSGLADQGVQQEHKSGMMGNLGGVDMMRQVTMILALAICLALAVFVMLWAQEPEY
RPLGKMETQEMVQVLDVLDKNKVKYQIDVDVIKVPEDKYQEVKMMLSRAGIDSPAANQDF
LNKDSGFGVSQRMEQARLKHSQEENLARAIEQLQSVSRAKVILALPKENVFARNASKPSA
TVVINTRRGGLGQGEVDAIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGASATARRE
LELVQQKEAEYRTKIESILVPILGPDNFTSQVDVSMDFTAVEQTSKRFNPDLPALRSEMT
VENNTTGGSSGGIPGALSNQPPMESNIPEDATKAAESATAAAGNSHREATRNFELDTTIS
HTRQQVGAVRRISVSVAVDFKPGAAGENGQVARVARTEQELTNIRRLLEGAVGFSSQRGD
VLEVVTVPFMDQLVEDLPAPELWEQPWFWRAIKLGIGALVILVLILAVVRPMLKRLIYPD
SVNMPEDGRLGNELAEIEDQYAADTLGMLNTQEAEYSYADDGSIHIPNLHKDDDMIKAIR
ALVANEPELSTQVVKNWLQDNG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcggatccaattccggtttagctgaccaaggtgtccagcaagaacataagtca
ggaatgatgggaaatcttggcggtgtcgatatgatgcgccaggtgactatgattttagcc
ttagcgatttgtttagccttggcggtatttgtcatgctgtgggcacaggagccagagtat
cgtccattgggtaaaatggaaactcaggaaatggttcaggtgctagatgtacttgataaa
aataaagttaagtatcaaattgacgtggacgttattaaagttcctgaagataaatatcaa
gaagtcaaaatgatgttgagccgtgcaggtatcgacagtcctgcagccaaccaagatttt
ttgaataaagacagtggttttggtgtcagccaacgtatggaacaagctcgtcttaagcat
agccaagaagaaaacctcgcccgtgcgatagagcaactacaaagtgtcagtcgtgccaaa
gtcattcttgcgttacctaaagaaaacgtcttcgcccgcaatgcctctaaaccgagtgca
actgtggtgatcaatacccgtcgcggtggattaggccaaggtgaagttgatgctatcgtc
gatattgttgcttctgcagtacaaggtttagaaccatcaagggtgacggtaactgactct
aacggccgtttattgaactctggcagccaagatggcgcgtctgcgacggctcgccgtgaa
cttgaattagtacagcaaaaagaagctgaatatcgcactaagattgaatcgattctggtg
ccaattttaggtcctgataattttacctctcaagtcgacgtcagtatggattttactgct
gttgagcaaacatcaaagcgttttaaccctgatttaccggcactgcgcagtgaaatgacc
gttgaaaataacaccactggcggctcttctggtgggatccctggcgcgttatccaatcaa
ccgccaatggagtctaatattccagaagatgcaacaaaagcggcagagtcagcaacggca
gcagcaggtaattcgcaccgcgaagcgacccgtaactttgaattagataccaccattagc
catacccgccagcaagttggtgcagtgcgccgcattagtgtgtcagtcgcggtggacttt
aaacctggtgccgctggagaaaatggtcaagtagcccgtgttgcccgtacagaacaagaa
ctgaccaatatccgtcgtttgcttgaaggcgcggttggttttagctcacaacggggggat
gtgctggaagtggtaaccgttccctttatggatcaattggttgaagatttacccgcacca
gagctttgggagcaaccttggttttggcgtgcgattaagcttgggattggtgcgctagtg
attttggtgctgattttagctgtggtacgtcctatgctgaaacgcttaatctatcctgac
agtgtgaatatgcctgaggatggcagattaggtaatgaattagccgaaattgaggaccaa
tatgcggctgatacgctagggatgcttaatactcaagaggcggaatacagttatgctgac
gatggctcaattcatatccctaatcttcacaaagatgatgatatgattaaagctatccgt
gcgctcgtggcgaatgagcctgagctctctactcaagtcgtgaaaaactggttacaagac
aatggctga
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