Shewanella oncorhynchi: RA178_07660
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Entry
RA178_07660 CDS
T09381
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RA178_07660
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sog01007
]
RA178_07660
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sog03016
]
RA178_07660
Enzymes [BR:
sog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
RA178_07660
Amino acid related enzymes [BR:
sog01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RA178_07660
Transfer RNA biogenesis [BR:
sog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RA178_07660
Prokaryotic type
RA178_07660
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
TIR
TIR_2
Motif
Other DBs
NCBI-ProteinID:
WMB74477
UniProt:
A0AA50KH43
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Position
complement(1680909..1682624)
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AA seq
571 aa
AA seq
DB search
MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE
MNKAGAIEILMPMVQPADLWVETGRWEKFGPELLRFKDRHNRDFVLGPTHEEVITDLIRK
EVSSYKQLPLNLYQIQTKFRDEVRPRFGMMRSREFLMKDAYSFHLDVDTMNETYEAMYTA
YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIEKAESPM
PTEPRGATTEALRLVDTPNAKTIAELVEQFGLDITKTVKTLIVMGATEATPLVALIVRGD
HELNEVKADKLDLVASPLEMAPEALIRDAIGAGPGSLGPIGLKIPIVIDHSVSVMSDFAA
GANVDDKHYFGINWERDLPTAQVADIRNVVEGEPTPDGSGTYAMARGIEVGHIFQLGTNY
SKSMNATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIIWPEAIAPFSVGILPM
NMHKSHRVTDIAEQLYKDLNEAGIEVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDA
GVFEYKNRRTGEKQDIPFDQLLDFLKNAVKG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcagcaagtacctgctatcaacacagaaagaaactcctgccaacgcagaagtc
attagtcatcaattaatgttacgtgcgggcatgatccgtcgtaatgcgtcgggcctttac
agctacctccccacgggcttacgcgtattgcgtaaagtcgaagccattgttcgtgaagaa
atgaacaaagccggtgcaattgaaattctaatgcctatggtgcaaccggcagacttgtgg
gtagaaacaggtcgttgggaaaagtttggccccgagctgctgcgctttaaagatcgccac
aatcgcgacttcgtactgggcccaacccacgaagaagtgatcacagatctcattcgtaaa
gaagtcagctcatacaagcaattaccgctgaatctttaccaaattcaaaccaaattccgt
gacgaagttcgcccacgttttggcatgatgcgctcacgtgaattcttgatgaaagacgcc
tactctttccaccttgacgtcgataccatgaatgaaacctatgaggctatgtacacagcc
tatagcaacattctatcgcgcatgggtttagctttccgcccagttttagctgatacgggt
tcaatcggtggcagcatgtcacacgagttccatgttctagcacaaagcggtgaagattta
attgcttactcaacgggcagcgattacgcggctaacattgagaaagctgaatcacctatg
ccaactgaaccacgcggcgcaaccactgaagcattgcgtttagtcgataccccaaatgca
aagaccattgcggaattagttgagcagtttggtttggatatcactaaaacggtcaaaacc
ttaatcgtaatgggtgcgacagaagcgacgcctttagtggcgctgattgttcgtggcgac
catgaactcaacgaagtcaaggctgacaagttagacttagtcgcatcaccattggaaatg
gcgccagaagcgctgatccgtgacgccattggcgcaggtccaggttcacttggccctatc
ggtcttaaaatccctatcgttatcgatcacagcgttagcgtaatgagcgattttgccgcc
ggtgctaacgttgatgataaacattattttggtatcaactgggaacgcgatctgccgaca
gcgcaagttgccgacatccgtaacgtagtcgaaggcgagccaacacctgatggttcaggc
acttatgctatggcacgcggtatcgaagtgggccatattttccaactgggcactaactat
tctaaatcgatgaacgcgactgtacttgacgaaaatggcaagtcacaggtgctactgatg
ggttgttacggtgtcggcgtgagccgtattgtggcagcagccatcgaacaaaacttcgat
gaccgtggcatcatttggccagaagcgattgcaccatttagcgtgggcattctgccaatg
aacatgcacaaatcgcaccgcgtcaccgatatcgccgagcagttatacaaagacttaaac
gaagcgggtattgaagtgttattggatgatcgtaaagagcgtccaggcgtgatgttcgct
gatatggaactgattggtatcccacatacagtggtgattggcgatcgcaatattgatgct
ggcgtatttgaatacaaaaaccgccgtaccggtgaaaaacaagatattccattcgatcaa
ctgctcgacttcctgaaaaacgcagttaaaggctaa
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