Shewanella oncorhynchi: RA178_07715
Help
Entry
RA178_07715 CDS
T09381
Name
(GenBank) cytochrome c3 family protein
Organism
sog
Shewanella oncorhynchi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtrc-MtrF_II-IV_dom
Cytochrome_C7
Cytochrom_c3_2
Paired_CXXCH_1
Collagen
Motif
Other DBs
NCBI-ProteinID:
WMB74488
UniProt:
A0AA50KG19
LinkDB
All DBs
Position
complement(1696322..1698421)
Genome browser
AA seq
699 aa
AA seq
DB search
MRIFTSRKLAYLVALALTGALVGCGDDGKDGVDGAPGTPGIPGTPGEPGTPGEPGTPPPV
TSSTMTNVKVINYSFGEGSITYEFEITDENNNLINGLLNAQAKVAALTDKGFITNRTEAD
KNGVADNVHIGGEATQATVGAELTALADGHYQFKVPMKGVNPSTEGIVWLRVGGNNGIAT
SKPLVVNKPEGTHSTTTDSCYSCHIDYSTSPRRHASYVATGMDSEVTFVEGCLVCHGSVS
RAVVNAEGFSTGGYATNTLSKIGHINHQDFTKDFSVQNCTSCHVEAPKNINVAGPGCIDC
HDSGGVPGAIIPSNGADLRIMHESKAGITERQAIRAKYKLSLSTPVKVDDISTKTDHYAP
TGAAAAVTAPGWCTTLTVKDTDGNVFSIKDNFNYSSPLVYDAKKPVVYAGAYLHSYENGS
LVGRPGNRTNYYYGYNTDGTKNICHLLTDISAVNANYVYSARVTFSTAGWMEYDGKQRYQ
SNGSLRATGYDGSMGISFTAYSDVVNPVTTQKVSGFERREIASTNSCTTCHNDATAFHKN
GAFDEGGKACIACHDNGMERTSAALGAGFGPMVHSWHWGNGAKVGEVKADGTQAQTANGA
GAIEASTSCVACHEKAIDLSKVPNQYIAEPGSKMTSPVTANCYACHTSDSAKAHMASNGG
EISIPKVADWFKQPTSESCAVCHDTGRSSGIDKYHKFTR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttcacctctagaaaactggcatatttagttgccttagcactaactggcgcc
cttgttggctgtggcgatgatggtaaagatggtgtagatggagcaccaggaacgcccggt
atccctggaacacccggtgaacctggaacacccggtgagcctggaacaccgcccccagtc
accagttctactatgactaacgtcaaagtgatcaactatagctttggcgaaggcagtatc
acttacgaatttgaaattacagatgaaaacaataacctaatcaacggactgttaaatgct
caagccaaagtggcggcactaacagataaaggcttcatcactaaccgcaccgaagctgat
aaaaatggtgttgcagataacgtccatattggcggtgaagcaactcaagcaaccgtcggc
gcagaattgaccgctttagctgatggtcattaccaatttaaagtaccaatgaaaggggtt
aatccaagtactgaaggtatcgtttggttacgtgtcggtggtaataatggtattgcgacc
tctaaacctctggtcgttaacaaacctgaaggcacccattcaaccacaactgatagttgt
tactcttgccatatcgactactcaacaagccctcgtcgtcatgcaagctatgtcgctact
ggcatggacagcgaagtcaccttcgtggaaggctgtttagtgtgtcacggttcagtcagc
cgcgcagttgtcaatgctgaaggtttctctacgggtggctatgcgacaaacaccctatct
aaaattggtcatatcaatcaccaagattttactaaagacttttcagtacaaaactgtaca
tcttgtcacgttgaagcacctaaaaacatcaacgtagccggaccaggttgtattgattgc
catgacagtggtggcgtaccaggggctattatcccaagtaatggtgcggatctgcgcatt
atgcacgaaagcaaagcgggtataaccgaacgccaagcgattcgcgctaagtataaattg
agtctatcaacacctgttaaagtagatgatatttctaccaagacagaccactatgcgccg
acaggtgctgcggccgcagtaaccgccccaggctggtgtacaacactgacagtgaaagac
accgatggtaacgtctttagcattaaagacaactttaactattctagcccgctagtatat
gacgctaagaaacccgtagtttatgcgggcgcttatttacattcctatgaaaatggcagc
ttagtgggtcgcccaggtaaccgtactaactactactatggttacaacactgacggcact
aaaaatatctgtcatttactgacggatatcagcgcagtgaatgctaactatgtttattct
gcccgcgtgacattcagtaccgctggttggatggaatatgatggcaagcaacgctaccaa
agtaatggcagcctaagagcgacaggttatgatggttctatgggcatatcctttacggct
tactcagatgtcgttaaccctgtcaccactcaaaaggtctctggcttcgaacgtcgtgag
atagcgagtactaacagctgtactacttgtcacaacgatgccactgcgttccacaaaaat
ggtgccttcgatgaaggtggtaaagcttgtatcgcctgccatgacaacggcatggaacgt
acttcagcagccttaggcgcaggttttggtcctatggtgcacagctggcactggggtaat
ggcgctaaagtcggtgaagttaaagctgatggaactcaagcgcaaaccgctaacggtgca
ggcgcgattgaagcctctactagctgcgttgcctgtcatgaaaaagcgattgatttaagc
aaagtgccaaatcaatacatcgctgagccaggtagcaaaatgacaagcccagtcaccgct
aactgttatgcctgccacactagcgattcagctaaggcgcatatggcaagcaacggtggt
gaaatcagcataccaaaggttgctgactggtttaaacaaccgacctctgaatcctgtgca
gtatgtcatgacacaggtagaagttctggtattgataaataccacaagtttactcgctaa
DBGET
integrated database retrieval system
