Shewanella oncorhynchi: RA178_07770
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Entry
RA178_07770 CDS
T09381
Name
(GenBank) acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00280
Valine, leucine and isoleucine degradation
sog01100
Metabolic pathways
Module
sog_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RA178_07770
Enzymes [BR:
sog01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
RA178_07770
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
BT_MCC_alpha
HlyD_D23
RimK
HlyD_3
ATPgrasp_ST
GCV_H
GARS_A
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
WMB74499
UniProt:
A0AA50Q4G9
LinkDB
All DBs
Position
complement(1710673..1712715)
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AA seq
680 aa
AA seq
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MLTKHMFTKLLIANRGEIACRIIKTAHAMGVRTVALYSDADKEARHVSMADESFYLGGSA
PADSYLKGDLIIDIAKKAGAQAIHPGYGFLSENADFARKCEAAGIAFVGPGSDAIDAMGS
KSAAKSIMTAANVPLVPGYHGDDQTDATLKAEALKIGFPMLIKAAYGGGGKGMRIVENEG
EIMEAVNSARREAASSFGNDKLLMERYLRQPRHVEVQVFADTFGNAIYLSDRDCSIQRRH
QKVVEEAPAPGLSDALRAQMGEAAVAAAKAIDYVGAGTVEFLLDTDNSFYFMEMNTRLQV
EHPVTEMVTGQDLVKWQLMVASGQPLPLKQDEVRIHGHSFEVRIYAEDPQNEFLPASGKL
NFLREPEQSKYVRIDSGIRENDVISNFYDPMIAKLIVWDESRPRALQRLVHALESYQISG
LKHNIEFLANIAEHPAFANADFSTDFIGRYGDTLIGTASSEADTALAFAALYQVLARKEA
AKAQAINSADPYSPWGQVSGFRLNSCSQHNIALLDDAHELQQLVMLDLGGMYQLPLHGQD
WLLNGELKQDLLLAEINGHKSKVPVSAQGDDFTLFLSSGSYHFKAVQTLVVEEQASNADK
LKAPMNGTVVTHLVDVGTQVKSGQGLLVMEAMKMEYTIEAPFDGIVTEFYFKAGELVTDG
ATLLNVEPLETNEPTAIKEA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaagcacatgtttaccaaactattgattgctaaccgcggtgaaatcgcctgt
cgcatcatcaaaacggcccatgccatgggcgttcgcaccgttgccctatattccgatgcc
gataaagaagcgcgccatgtctccatggccgacgaatccttctatttaggcggcagtgcg
ccggcagactcctatttaaagggcgatttgattatcgacatcgccaaaaaagcgggcgca
caagcgattcacccaggttatggtttcttgtctgaaaatgccgactttgcccgtaaatgt
gaagccgctggcatcgcctttgttggcccaggcagtgatgctatcgatgccatgggcagc
aaaagcgccgctaaatctattatgactgcggcaaacgtgcccttagtgccgggttatcac
ggcgatgaccaaaccgatgcgaccttaaaagcggaggctctgaaaatcggcttccctatg
ctgattaaagcggcttatggcggcggcggtaaaggcatgcgtatcgtcgagaatgaaggc
gaaatcatggaagccgttaactcggcgcgccgtgaagcggcctcttcttttggtaacgat
aagttattgatggagcgttatttacgccagccgcgccacgtcgaagtgcaagtgtttgcc
gacacctttggcaacgcgatttatttatcggatcgcgattgttcgattcaacgtcgccac
caaaaagtggttgaagaggcgccagcaccagggttaagcgatgcactgcgtgcccaaatg
ggtgaagcggccgtcgcggcagccaaagccatcgattatgttggcgcggggactgtagag
tttctgctcgacacagacaatagcttctatttcatggaaatgaacacccgtctgcaggtt
gagcatccagtgactgagatggtcacaggccaagatttagtgaaatggcaattgatggtc
gccagtggtcagccactgccccttaagcaagatgaagtgcggatccacggccattccttt
gaagtgcgaatttatgccgaagatccacagaatgagtttttacccgccagcggtaagctc
aactttttacgtgaacccgagcaaagtaaatacgtgcgtatcgattcgggtattcgcgaa
aacgatgtgatcagtaacttctacgatcctatgattgccaagcttatcgtctgggatgaa
tcgcgcccgcgcgccctgcaacgtttagtgcatgccttagagtcgtatcaaatcagcggc
cttaagcacaacattgagtttttagcgaacattgccgaacacccagcgtttgccaatgcc
gactttagcactgactttattggccgttatggcgataccctgattggtacagcttcaagc
gaagccgacactgcccttgcctttgccgcgctgtatcaagtgcttgcccgtaaagaagcc
gccaaagcgcaagcgatcaacagcgccgatccttactcgccttggggtcaagtgagcggc
tttagactcaacagttgcagtcagcacaatattgccctgctcgatgatgcccatgaattg
cagcagttagtgatgctcgatttaggcggcatgtatcagctaccgctgcacggtcaagat
tggttactaaatggcgagctgaaacaagatttactgctcgccgaaatcaacggccataag
agtaaagtgcccgttagtgcccaaggtgatgactttacgctatttttatcctctggcagt
taccactttaaagcagtgcaaacactcgtggtcgaagaacaagccagcaatgctgacaag
ttaaaagcaccgatgaacggtacggtagtgacccatttagtcgatgtcggcacacaagtg
aaatcgggccaaggtttgctagtgatggaagccatgaagatggaatacaccatcgaagcc
ccctttgatggcatagtcactgagttctactttaaagcgggcgagctggtcaccgatggt
gcaaccttgcttaacgttgagccgttagagacaaacgagccaaccgcgatcaaggaagcc
taa
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