Shewanella oncorhynchi: RA178_08640
Help
Entry
RA178_08640 CDS
T09381
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sog03036
]
RA178_08640
Chromosome and associated proteins [BR:
sog03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RA178_08640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WMB74658
UniProt:
A0AA50KGW9
LinkDB
All DBs
Position
1918791..1922207
Genome browser
AA seq
1138 aa
AA seq
DB search
MRLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS
MADVIFNGSSARKPVSVAGVELIFENKEGRLAGQYASYEEIAVKRQVSRDGESWYFLNGQ
KCRRKDITDLFMGTGLGPRSYAIIEQGTISRLIESKPQDLRTFIEEAAGISRYKERRRET
ENRIRHTRENLERLGDIRSELGKQLDKLAQQAKAAKQYRELKQAERKTHAELLVMRYQEL
QAQMASLSEQISAIEVQQAAAQSLAQTDELQTTELQVQLAQLAEQEQRAVEAYYLTGTEI
AKLEQQLQNQKQRDAQLETQLAQVKEQIQQNTDKLNGYKASLSALELELAKLGPQHDEQQ
EIMDELQSQWEMSIERSQLQAEVARQQAADVSQHKLQLELRRSQLAHQQQLLQHKQQQSR
EQQAQLSALMDGDLASSITPLQQDIDSLDDALTLQNEINHQQEQSVSASTQALDEARHSA
EQIQQQLTATKARHELVEQWLTKQEQQSDKPQLWQSLTVENGWETAAELALNGLLTLPVG
VTETEMGFQALASQSSQSEFLQAKVNLAPWLAGLKWAKDIHAAKELLPQLTSDQRIVTAD
GYLLGQGFLITKTEGAQSLVQLSKEQAQLAQNILDLQQSLQIRQDKMTDLAAILQQQRLQ
LTDGAQKLHQLQLDKATKSMQLSGLIEQVKARVEQQSKLDAALSTSLIDIERLSEQCELL
AEQEMELDETLQASEDIQRQLIQDTQADTVRHQALKGRITEVERQLSATATGLQAVTMRM
AVSTEQIELQQVRVNELIHSRESVLTELAKVAQLSGVQNSVQLTEQLTQLLKQQHEQQQG
LKEVRQQQSVLTDTLNRIGIKQKQELGKLEDLTQSLSTLKLRREGIKGQANSQLEALREQ
QIILSEILGNLPAEGMPDKWQSDLDQIRQKIVRLGAINLAAIEEFEQQSERKSYLDHQDD
DLNKGLATLEEAIRKIDKETRSRFKTTFDSVNEDLGRLFPKVFGGGRAYLALTDDDLLET
GVTIMAQPPGKKNSTIHLLSGGEKALTALSLVFAIFRLNPAPFCMLDEVDAPLDDANVER
FCRLLKEMSQSVQFIYISHNKITMEMADQLIGVTMHEPGVSRIVAVDIEQAVAMADAG
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgagattaaaacagataaaacttgccggctttaagtcgtttgtcgatcccacgaaaatt
ccttttttacaggcattaaccgccattattggcccaaatggctgcggtaaatcgaacgtg
atcgatgccgtgcgttgggtgctcggtgaaagctcggcgaagcacctacgcggtgattct
atggcagatgtgatatttaacggttcaagcgcgcgaaaacctgtgtctgtagcgggtgtt
gaacttatttttgaaaacaaagagggtcgcctcgctggtcagtatgccagttatgaagaa
atcgccgttaagcgtcaggtgagccgcgacggtgagtcttggtattttctcaatggtcaa
aagtgtcgtcgtaaagacattaccgacttgtttatgggcacaggtcttggcccgcgcagt
tatgccattatcgagcaaggcactatttcccgcctgattgaatctaaaccccaagacttg
cgcacctttattgaggaagccgctgggatttcccgctataaagagcgtcggcgcgaaact
gaaaaccgtattcgccatacccgcgaaaacctcgagcgtttgggcgatattcgcagtgaa
ctcggtaagcagttagataaactcgcgcagcaggctaaagccgctaaacaatatcgtgag
cttaaacaggccgagcgtaagacccatgctgaactccttgtgatgcgctatcaagagttg
caagctcagatggcgagcctatctgagcagataagtgctattgaagtgcagcaagcggcg
gcgcagtcactcgcgcaaaccgatgaattacaaaccactgaactgcaagtacaactcgcg
caactggcggagcaagagcagcgagcggttgaagcctattatctgactggtactgaaatc
gctaagttagagcaacagctacagaatcaaaagcagcgcgacgcccagctcgaaacccag
ttggcgcaagtcaaagagcagatccaacaaaacaccgataagcttaacggctataaagcg
agtcttagcgcgttagagcttgagcttgccaaacttgggccacagcatgatgagcaacaa
gagatcatggatgagctgcaatcccaatgggaaatgagcattgaacgcagtcagctgcag
gccgaagtggcgcgccaacaggcagcggatgtttctcagcataagttacagcttgaactg
cgtcgcagccagttagcgcatcagcagcaattactgcaacacaaacagcagcaaagtcgt
gagcagcaggcgcaactttcggcgttaatggacggtgatctcgcatcgagtattacacca
ttgcagcaagatattgattctttggatgatgcgctcacactgcaaaatgaaattaatcat
cagcaagaacaaagtgtaagtgcaagtacgcaagccttagatgaagcccgccatagcgct
gagcaaattcagcagcaattaaccgcgactaaagcgcgccatgagctggttgaacagtgg
ttgactaagcaagaacagcagagtgataaaccgcagttatggcagagtttaaccgttgaa
aatggttgggaaactgcggccgaactcgccctaaatggcttgttgaccttgcccgttggc
gtcactgaaactgaaatggggtttcaagcgttagcgtcacaatcaagccaaagtgaattt
ttacaggctaaggtgaatctcgccccttggttagcggggcttaagtgggcaaaggatatc
catgcagcgaaagaactgctgccacagctaacatccgatcaacggattgtcactgccgac
ggttatctactgggacaaggttttttaatcacgaaaacagagggcgcccagtcactggtg
caactcagtaaagagcaagctcagttagcgcaaaatatcctcgatttgcaacaatccctg
cagattcggcaagacaagatgacagatcttgcggctattttgcagcaacaaagactgcaa
ctgaccgatggcgcgcaaaaattacatcaattgcagttagacaaagcgactaagtcgatg
cagcttagtggtttaatcgagcaagtgaaggcgcgcgtcgaacagcaaagtaaactcgac
gcggctttaagtacgagtttgattgatattgaacgcttaagcgagcaatgcgaattatta
gcagaacaagaaatggagctcgatgagacgctgcaggctagtgaagatattcagcggcaa
ctcatccaagacacacaggccgatactgtgcgccatcaagcattaaaagggcgtattact
gaggttgaacgtcaattatcagccactgcgacgggtttgcaagccgtgactatgcgcatg
gccgtgagcacggagcaaattgaattacagcaagtgcgtgtcaatgaactcatccactcc
cgcgagtctgtgttaacagaacttgccaaagttgcccaattgagtggggtgcaaaatagt
gtgcagctgactgagcagttaacgcagttactaaagcaacaacatgagcaacaacagggc
ttaaaagaggttcgtcagcagcaaagtgtgctcacagacacattaaaccgtataggaata
aagcaaaaacaagagcttggtaagcttgaggacttgactcaaagcctgagcacgttaaag
ttacgtcgtgaaggaataaaaggccaagcgaatagtcagctggaagccttacgggaacag
caaatcattctgtctgaaatccttggaaacttgcccgcagaggggatgccagacaagtgg
cagagtgatttagatcaaatacggcagaaaattgttcgtttaggtgccattaaccttgcg
gcgatcgaagaatttgaacagcaaagtgagcgaaaatcttatcttgatcatcaagatgac
gatttaaataaagggcttgcaaccttagaggaagcgatccgtaaaatagataaggaaacc
cgaagccgctttaagacgacatttgactcagtcaacgaagatctcggacgcttatttccg
aaagtgtttggtggcggccgagcttatttagcgttaactgacgacgatttgttagaaacg
ggcgtgactatcatggcccaaccaccggggaagaagaacagcacaatccatcttctttcg
ggtggtgaaaaagcattaaccgctttatcattggtattcgccatttttaggctgaatcct
gctcccttctgtatgttagatgaagtggatgcgccattagacgatgccaacgtagaacgc
ttctgtcgattgctaaaagaaatgtcacagagcgtacagtttatttatatcagccataac
aaaataaccatggaaatggcggatcaacttattggcgtgactatgcacgagcccggtgtg
tctcgtatagttgcggtagacatagagcaagcggtggcgatggctgacgctggataa
DBGET
integrated database retrieval system
