Shewanella oncorhynchi: RA178_09030
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Entry
RA178_09030 CDS
T09381
Name
(GenBank) putative DNA-binding domain-containing protein
KO
K09929
uncharacterized protein
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
RA178_09030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2063
NGO1945_C
PqqD
DUF6680
Motif
Other DBs
NCBI-ProteinID:
WMB74728
UniProt:
A0AA50KGK6
LinkDB
All DBs
Position
2009128..2009874
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AA seq
248 aa
AA seq
DB search
MDFKQVQQSFIDYIRDPSSPLPADTDFRRMQVYRELFFNNVLGFVSNGFPVLKSLYSEED
WLTLVQRFFSQHDCQSPIFIDIAGEFLDFLQQEYQPTANDPVFMLELAHYEWLELAVAVA
QASEDESQLSSAQMSTQALCLSQTARVAQYHFEVQHIRQDYRPQQRLDTPVFFCLYQDAD
CEVCFLQLNPLSAQVLAFLQAQGQAGFKEIVDWLTITYPQMAPEIIEQGCMQLLEQLAAK
GIVRGRQS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggattttaagcaagtgcagcaatcctttatcgattatatccgcgatccctcttcgcca
ttgcccgcggatactgatttccggcgtatgcaggtttaccgcgagttattttttaataat
gtgctgggatttgtgtcgaacggctttcccgtgcttaaaagtttgtattctgaggaggat
tggctgacattggtgcagcgttttttcagtcaacatgattgccaatcgcccatttttatc
gatatagcgggtgagtttttagattttttacagcaggaatatcagcccacggcaaatgat
cctgtttttatgctcgaattagcgcactatgaatggctagagttggccgttgcggtcgca
caggcgagtgaggatgaatctcaactcagctcagcgcaaatgtcgacgcaggctttatgt
ttgtcgcagacggcgagggtagcgcagtatcactttgaggtgcagcacattcgtcaggat
tatcggccgcagcaacgacttgatacgccagtgtttttttgtctctatcaagatgccgat
tgtgaagtgtgcttcttacagttaaatcccttaagcgcacaggtgctggcatttcttcaa
gctcaaggccaagcgggttttaaagagatagttgattggttaacaatcacttaccctcaa
atggcgccagagattattgagcaaggttgtatgcagttactcgagcaattagcggccaaa
gggatagtgcgcggacgtcagtcttaa
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integrated database retrieval system
