Shewanella oncorhynchi: RA178_09915
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Entry
RA178_09915 CDS
T09381
Name
(GenBank) efflux RND transporter permease subunit
KO
K03296
hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
RA178_09915
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Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
DUF3153
Motif
Other DBs
NCBI-ProteinID:
WMB74886
UniProt:
A0AA50Q837
LinkDB
All DBs
Position
complement(2169901..2172948)
Genome browser
AA seq
1015 aa
AA seq
DB search
MNLTRLAIKRPVTTSMFFFAILLFGLASSRLLPLEMFPGIDIPQIVVEVPYKGSTPAEVE
RDITKVLEESLATMGGIDELESESSQEGAEIEINMKWGENVATKSLEAREKIDAVRHLLP
KDVERVFIRQFSTADMPVLTIRISSDRELSGAFDLLDKQLKRPLERVEGVSKVSLYGVEQ
KQIEVRINADRLAASGFSATDLQQRLGRENFVLSAGTLRASNIVYQVSPKGEFRNLEDIK
ALVLIPGLTLGDIADVQFALPERIEGRHLDKHYAVGLDVFKESGANLVEVSDRVMKVIEL
AKQDQQFQGIRLFIMEDQASGVKSSLMDLLLSGLIGALLSFVVLYLFLRNLKMTLVVVSS
VPISIGMTLAAMYLLGYSLNILSMMGLLLAVGMLIDNAVVVTESVLQEKQGKHPKDNEES
VMTGVDKVSLAVLAGTMTTAIVFLPNIFGVKVEITIFLEHVAIAICISLAASLLVAKTLI
PLMLTKFHFDIAPEKDAGKLQRFYNNTLDWVLLRPWRSGVIAVAILASTALPLSMVKQDQ
EDSESNERIYINYQVEGRHNLNVTEAMINQMEEYLYNNKEEFHIDSVYSYYASDDGSSVI
LLKKDLPMSVDELKKKIRSGFPKYSIAKPQFGWGNDNSGVRVTLTGRSTSELINLSEQVI
PLLQNIKGLQDVRSELNGAQQEVIIRIDRQMAARLDLKLNEIASSISMALRGSPLRSFRH
DPNGELRIEMAYEKEWQKSLEKLKQLPIVRLDQRVYTLDNLAKIEIQPRFDTIKHFNRQT
SLSIGANLENLTTEEAQTKIKQVMENIRFPDGYDYSLRGGFERQDEDQNVMVTNMLLAVA
MIYIVMAALFESLLLPTAIITSILFSITGVFWALFITGTPISVMAMIGILILMGIVVNNG
IVLVDQINQMTPDLDKLSDTIREVCITRLRPVLMTVGTTVLGLVPLAMGDTQIGGGGPPY
YPMAIAIIGGLSFSTVTSLYLVPLCYQAFYRMRHRAAIRLGQADHFAKKLLPWTV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcacccgtttagccattaagcgccccgtaaccaccagcatgtttttctttgct
atcttgctgtttggtctcgcctcgagtcgcctattaccgctggaaatgttccccggtatt
gatatcccacagatagtggtggaagtgccttacaaaggctcgacccctgctgaagtggag
cgcgatattaccaaagtgctggaggaatccctcgcgactatgggggggattgatgagctt
gaatcagaatcctcccaagaaggcgccgaaatcgaaatcaacatgaagtggggggaaaac
gttgccactaagagcttagaagcgcgggaaaaaatcgatgcagtgcggcatttactgccc
aaagatgtggagcgggtctttatccgacaattctccaccgccgacatgcctgtgctcacc
atacgcatctcaagtgatcgtgagctttcaggtgcattcgatctactcgataaacagctc
aagcgtccacttgaacgtgttgaaggtgtctctaaggtcagcctgtacggcgttgagcaa
aagcaaattgaggtacgcatcaatgccgaccgccttgccgccagtggattttcagccaca
gatttgcaacaacgtctcggcagagagaactttgtgctgagcgcaggtacactcagggcc
agtaatatcgtttatcaagtttcacctaagggtgagtttagaaaccttgaagatatcaaa
gcactagtactgatccccggattgaccttaggcgatatcgccgatgtgcaatttgcccta
cctgaacgtatcgaaggtcgacatttagataagcactatgccgtgggtttggatgtgttt
aaggaatctggcgctaacttagtcgaagtgtcagaccgtgtcatgaaggtgattgagctt
gcgaagcaggaccaacagttccaaggtattcgcctatttatcatggaagatcaagcctct
ggagtaaaatcttcactaatggatttgctgctttcagggttaatcggtgcactgctgtcc
tttgtcgtgctgtacttattcctgcgtaatttgaaaatgactttagtggttgtgtcatcc
gtgcctatttcaatcggtatgacgctcgccgctatgtatctactcggttacagcttgaat
attctgtctatgatgggactcctgctcgccgtcggtatgttgattgataacgcagtggtc
gtcactgagagcgtactgcaggaaaagcaaggtaaacaccctaaagacaatgaagagtca
gtcatgacgggggtcgataaagtgtctctggcggtattggcaggcacaatgacaaccgcc
attgtatttttacctaatatttttggcgtaaaagtcgagatcactatttttctagagcat
gttgctattgcaatttgtatctcactcgccgcgtcgctattggtcgcaaaaaccttaatt
cctttgatgttgactaagttccacttcgacatcgcccccgaaaaggatgcgggtaaatta
caacgtttttacaataataccttagattgggtattgctcagaccttggcgttcaggcgtg
attgctgtagcgatcctcgcatccaccgccctgccgctatctatggttaaacaggatcaa
gaagacagcgagagcaatgaacgaatctacattaactaccaagtagaaggtcgacataat
ctcaatgtcactgaggcgatgatcaaccaaatggaagagtatctttataacaataaagag
gaattccatattgattctgtctacagctattatgcctctgacgatggctcatcggtgatc
ctcctaaagaaagatttgcctatgtcagtggatgagttaaaaaagaaaatccgcagtggc
ttccctaagtattccatcgccaaaccgcaatttggctggggcaatgacaactctggcgtg
cgagtcacactgacagggcgctcaacctctgagctgattaatttgagcgagcaagttatt
cctttgttgcaaaacatcaaaggattgcaagatgttcgctccgagcttaatggcgctcag
caagaagtgattatccgcattgatagacaaatggcggcgcggttagatttaaaactcaat
gaaattgcctcaagtatctccatggcactgcgcggttcaccgctgcgatccttccgccac
gatcctaatggcgagctacgcatcgaaatggcctacgagaaagaatggcaaaagtcactt
gagaaactcaaacagttacccatagtacgcctagaccaaagagtgtacaccttagataat
ctggcgaagattgagatccaaccccgcttcgatactatcaaacacttcaaccgccaaacc
tcgctgtcgattggggctaacttagaaaacctcaccacagaagaggcgcaaactaagatt
aagcaagtgatggaaaatatccgtttccccgatggttacgactattcactccgtggtggc
ttcgagcgccaagatgaagatcagaacgtgatggtgactaatatgctcttggctgtcgcg
atgatttatattgttatggcggcgttgtttgaatctctactgttaccgacggcgattatt
acctcaatcctattttccatcacaggtgtattctgggcgctgtttatcacaggtacccct
atttctgtgatggcaatgataggtatcttgattttaatggggatagtggtgaacaacggt
atcgttctggtggatcaaatcaatcagatgacaccggatctcgacaaattgtctgacacc
attcgggaggtgtgtatcacccgtttgcggccagtgttaatgacagtaggtacaacagta
ctgggattagtcccactggcgatgggtgatacccaaatcggtggcggcggcccgccatat
taccccatggcaatcgccattatcggtggcttatcgttctcgacagtgactagcttgtac
ttagtccccctgtgctatcaagctttttatcggatgcgtcaccgcgcagcgattcgctta
ggccaagccgatcactttgcgaaaaaactgttaccttggacggtttag
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