Shewanella oncorhynchi: RA178_09930
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Entry
RA178_09930 CDS
T09381
Name
(GenBank) citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00020
Citrate cycle (TCA cycle)
sog00630
Glyoxylate and dicarboxylate metabolism
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01120
Microbial metabolism in diverse environments
sog01200
Carbon metabolism
sog01210
2-Oxocarboxylic acid metabolism
sog01230
Biosynthesis of amino acids
Module
sog_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sog_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
sog_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RA178_09930
00630 Glyoxylate and dicarboxylate metabolism
RA178_09930
Enzymes [BR:
sog01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
RA178_09930
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-ProteinID:
WMB74889
UniProt:
A0AA50Q4R8
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Position
complement(2177573..2178859)
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AA seq
428 aa
AA seq
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MADLKAKLELPGNDSIELPVKQGTAGFDVIDISKLGSKGYFTFDPGFLATASCESAITYI
DGDLGILLHRGYPIDQLAVDSDYLDLCYLLLYGELPTKAQYTEFVHTVKTHTMVHEQLAF
FFRGFRRDAHPMAMLCGVTGALSAFYQDSLDVNDPRHREIAAYRLVSKMPTIAAMCYKYS
SGQPFVYPRNDLSYAGNFLSMMFAVPCEEYVVNPIVERAMDRIFILHADHEQNASTSTVR
LAGSSGANPFACIAAGIASLWGPAHGGANEACLQMLEEIGSVDRIPEFIERAKDKNDPFR
LMGFGHRVYKNFDPRAKVMRETCHEVLKELKVQDPLLDVAMELERIALEDEYFISKKLYP
NVDFYSGIIMKAIGIPTSMFTVLFALARTVGWIAHWKEMLDQPGHKISRPRQLYTGETAR
DFVAQDKR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttaaaagccaaattagaattaccagggaacgactcgatagaattgccagta
aagcagggaaccgctggttttgacgtaatcgatatcagtaaacttggcagcaaaggttac
tttacttttgatccaggttttcttgcgactgcctcctgtgaatctgcaattacctatatt
gatggtgatctaggtatattgttacaccgtggctatccaatcgatcaacttgccgttgac
tccgattacctagacctgtgttatttgctgctttacggtgaactaccgaccaaagcgcaa
tatactgagtttgtacatacagttaaaacccacactatggttcacgagcagctagccttc
ttctttagaggtttccgtcgtgatgcacatcctatggccatgttatgtggtgtgacgggt
gcattatctgcattttaccaagactctctggatgttaacgatccacgtcaccgcgaaatc
gccgcttatcgcttagtctcaaaaatgcctacgatagcagccatgtgctacaagtattct
tcaggccagccattcgtgtacccacgtaatgacttaagctatgcaggcaacttcttaagc
atgatgtttgctgtaccgtgcgaagaatacgtcgtgaaccctattgttgaacgtgcaatg
gacaggatcttcattttacatgcagatcatgaacaaaacgcatcgacttcaacagtacgt
ttagccggttcttcaggtgcaaacccatttgcgtgtatcgcagcgggtatcgcatctctt
tggggcccagcacacggcggcgctaacgaagcctgtttgcaaatgttagaagaaatcggt
tcagtagaccgtattcctgaattcattgaacgcgctaaagataaaaatgatcctttccgt
ctgatgggctttggacaccgtgtttacaaaaactttgacccacgagccaaagtgatgcgt
gaaacctgtcatgaagtgctgaaagaactgaaagtacaagatccactcttggatgtggca
atggagcttgagcgcattgcacttgaagacgaatacttcatttctaaaaagctgtatcca
aacgtcgacttctactctggcatcattatgaaagccattggtattccaaccagtatgttc
actgtgctgttcgcactggcacgtactgtaggctggattgctcactggaaagaaatgtta
gatcaaccaggccacaaaatcagccgtccacgtcagttatatactggtgaaactgcgcgt
gatttcgtcgcacaagacaaacgctaa
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