Shewanella oncorhynchi: RA178_09945
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Entry
RA178_09945 CDS
T09381
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00020
Citrate cycle (TCA cycle)
sog00190
Oxidative phosphorylation
sog00650
Butanoate metabolism
sog00720
Other carbon fixation pathways
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01120
Microbial metabolism in diverse environments
sog01200
Carbon metabolism
Module
sog_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sog_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sog_M00149
Succinate dehydrogenase, prokaryotes
sog_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RA178_09945 (sdhA)
00650 Butanoate metabolism
RA178_09945 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RA178_09945 (sdhA)
00720 Other carbon fixation pathways
RA178_09945 (sdhA)
Enzymes [BR:
sog01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RA178_09945 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
FAD_binding_3
FAD_oxidored
Thi4
Motif
Other DBs
NCBI-ProteinID:
WMB74892
UniProt:
A0AA50KH54
LinkDB
All DBs
Position
2180011..2181777
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AA seq
588 aa
AA seq
DB search
MSIPVREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDHWEQHMYDTVKGSDFIGDQEAIEFMCKTGPEAVIELEQMGLPFSRFENGTIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHCLYQQNVKHKTQVFSEWYALDLVKNDDGAVVGC
TAIEIETGDIVYFKAKATILATGGAGRIYASTTNAHINTGDGVGMAMRAGVQMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG
RGLDGPLGPHCLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMGGL
PTKVSGQVIRKNEDGTEQDVIGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG
KALDETDDPKDASDADIAASLARLNRWESNKDGEDPAQIRKDLQLCMQLNFSVFRRGDAM
AEGLEQLKVIRERLANAKLSDNSREFNTQRIECLELDNLMATAIATAYAANFRTESRGAH
SREDYLERDDENWLCHSLFDPITETMDRRAVNMAPKLREAFPPKKRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattccagtacgcgaatttgatgctgtagtgatcggtgccggtggcgctggtatg
cgtgcagcgctgcagatttccaaagaaggtaaaagctgtgcgcttttatcaaaagtattc
ccaacccgttctcataccgtatctgcgcagggtggtatcactgttgcgttaggtaacgcc
catgaagatcattgggaacaacacatgtacgataccgtgaaaggttccgattttatcggt
gaccaagaagcgatcgagttcatgtgtaaaaccggtcctgaagccgtgattgaacttgag
caaatgggtttgcctttctctcgtttcgaaaatggtacgatttaccaacgtccatttggt
ggtcaatctaagaactttggtggcgagcaggctgcgcgtactgcggcagctgccgaccgt
actggtcatgctttgcttcactgtttatatcaacaaaacgttaagcataagacgcaagtc
ttctcagaatggtatgcattagatctcgttaaaaacgatgatggcgccgttgtgggttgt
actgcgattgaaattgaaacgggcgatatcgtttatttcaaagctaaagcaacgattctt
gcgactggcggtgcagggcgtatttacgcttcgacaactaacgcgcatatcaacaccggt
gacggcgtaggtatggcaatgcgtgctggcgtgcaaatgcaagacatggaaatgtggcaa
ttccacccaactggcatcgctggcgcgggtgtacttgtgactgaaggttgtcgtggtgaa
ggcggttatctactgaacaaagacggcgagcgtttcatggagcgttatgcccctaacgcg
aaagatttggcatcacgtgacgtggtagcacgttcaatgatgactgaaatccgcgaaggt
cgtggtttagacggtccattaggcccacactgtttactgaagcttgatcacttaggtaaa
gaaacattagaagcacgtttaccaggcgtgtgtgaattgtctcgtacttttgcccatatc
gatccagccgatggtccaattccagtactaccaacgtgtcactatatgatgggcggccta
ccaactaaggtcagtggtcaagttattcgtaagaatgaagacggcactgaacaagatgtt
attggtctgttcgctgtgggtgagattgcctgtgtatctgttcacggtgcaaaccgctta
ggtggtaactcattgctcgacttagtggtctttggccgcgcagcgggtcaacatttaggt
aaagctttggatgagactgacgatccaaaagacgcaagtgatgcggatattgctgcctct
ctggcgcgtctgaatcgttgggaaagcaacaaagatggcgaagatccagcgcaaatccgt
aaggatctacagctgtgtatgcaattaaacttctctgtattccgtcgtggcgatgctatg
gctgaagggttagagcagttgaaagtgattcgtgaacgtcttgcaaatgctaaattgtct
gataactctcgtgaattcaatactcaacgtattgaatgtttagagttagataacttgatg
gcaacggcaatcgccacggcttatgcggctaacttccgtaccgaaagtcgcggtgctcac
tcacgtgaagattatttagagcgtgatgatgagaactggttatgccacagcttatttgac
ccaatcactgaaacgatggatcgtcgtgcagtgaacatggcacctaagttacgtgaagca
ttcccgccgaagaaacgtacctactag
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