Shewanella oncorhynchi: RA178_09950
Help
Entry
RA178_09950 CDS
T09381
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00020
Citrate cycle (TCA cycle)
sog00190
Oxidative phosphorylation
sog00650
Butanoate metabolism
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
sog01120
Microbial metabolism in diverse environments
sog01200
Carbon metabolism
Module
sog_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sog_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sog_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RA178_09950
00650 Butanoate metabolism
RA178_09950
09102 Energy metabolism
00190 Oxidative phosphorylation
RA178_09950
Enzymes [BR:
sog01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RA178_09950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_17
Fer4_7
Fer4_9
Fer4_18
Fer4_3
Fer4
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
WMB74893
UniProt:
A0AA50KGV8
LinkDB
All DBs
Position
2181789..2182496
Genome browser
AA seq
235 aa
AA seq
DB search
MKLTFAVYRYNPDVDTKPYMQDYSLEVAEGSDMMVLDALIKLKEQDPTLSFRRSCREGVC
GSDGVNMNGKNGLACITPISTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPYLI
NDEKQPAREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLI
DSRDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLKRAV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgacatttgcagtttatcgctacaatcctgacgtagatactaaaccgtatatg
caggattacagcttagaagtggctgaaggctctgacatgatggtgctcgatgcactgatc
aagttgaaagagcaagatccgactttgtcattccgtcgctcatgccgtgaaggcgtgtgt
ggttcagacggcgtgaacatgaatggtaagaatggtctggcgtgtattaccccaatttca
acctttaaaggcaagaaattagaaatacgtccattaccaggtatgccagttgttcgtgac
ttagtggttgatttaactcagttctataagcagtatgagaagatcaagccttacctcatc
aatgatgagaaacaacccgctcgtgaacacttacaatcccctgaagagcgtgctcattta
gatggcttgtatgaatgtatcatgtgtgcctgttgttctacggcttgcccatcattctgg
tggaatcctgataagtttatcggtccaagcggtctgcttcacgcatatcgtttcttgatc
gacagtcgcgatacagctacagaagaacgtttatctgagctggacgacgcctatagtgtg
ttccgttgccatggcatcatgaactgcgttgacgtttgtccaaaaggtcttaatccgact
aaagcaattggtcatattaagtccatgctgttgaagcgagcagtgtaa
DBGET
integrated database retrieval system