Shewanella oncorhynchi: RA178_10145
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Entry
RA178_10145 CDS
T09381
Symbol
rluE
Name
(GenBank) 23S rRNA pseudouridine(2457) synthase RluE
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sog03009
]
RA178_10145 (rluE)
Enzymes [BR:
sog01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
RA178_10145 (rluE)
Ribosome biogenesis [BR:
sog03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RA178_10145 (rluE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
DUF8729
Motif
Other DBs
NCBI-ProteinID:
WMB74932
UniProt:
A0AA50Q7J9
LinkDB
All DBs
Position
complement(2229205..2229990)
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AA seq
261 aa
AA seq
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MNKNKFQPKGANASASSPAKSPIKPAKPASRGPANRATAVDSKVAPARNANGSLKKEPFK
NPNRRAIAAAKPVQNQTLAPIIVLFNKPFDVLCQFTDEQGRKTLKDYIPIADVYAAGRLD
RDSEGLLLLTNDGQLQARLTEPKKKTFKTYWVQVEGVPTEDVLTKLRQGVELNDGITLPA
KVKIMDSPDVWPRNPPVRERKNIPTTWLEIQIHEGRNRQVRRMTAHIGFPTLRLIRYKIG
QWSLDNLPSGEHKCIRLGDEV
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacaagtttcaacctaaaggtgccaatgccagcgcaagttccccagccaag
agcccgattaaacccgctaagcccgccagcagaggccctgccaaccgcgctaccgccgta
gatagcaaagtggcgccagcacgaaatgccaatggcagtttaaagaaagaaccctttaaa
aatcctaatcgacgcgcaattgcggcggcaaaaccggtgcagaaccaaacgctcgcaccg
attattgtgctgtttaataaaccttttgatgtactttgccagtttaccgatgaacaaggt
cgcaaaaccctaaaagactatatcccgattgctgacgtgtatgccgcaggccgcttagac
agagacagtgaaggcttattgctgctgaccaatgacggtcaattacaggcaaggctgaca
gagccaaaaaagaaaacctttaaaacctattgggtgcaagtagaaggcgtaccgacggaa
gatgtactgacaaaactgcgccaaggtgttgaattaaatgatggtataacgctgccagct
aaagtcaaaattatggattcacccgacgtttggccacgtaatccaccggtgagagagcgc
aaaaatatcccaacaacttggctagaaatccaaattcatgaaggccgcaaccgccaagtc
agacgcatgacagcgcatatcggttttccgaccttaagattaatccgttataaaataggc
caatggagtctagataatttgccatcgggtgagcataaatgcatccgtctcggtgatgaa
gtctaa
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