Shewanella oncorhynchi: RA178_11170
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Entry
RA178_11170 CDS
T09381
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
RA178_11170 (lapB)
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Ortholog
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GFIT
Motif
Pfam:
Zn_ribbon_LapB
TPR_19
TPR_7
CFAP70_TPR_C
NRDD
TPR_FimV
ZZ
ARM_TT21_C
Motif
Other DBs
NCBI-ProteinID:
WMB75131
UniProt:
A0AA50KI61
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All DBs
Position
2475421..2476581
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AA seq
386 aa
AA seq
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MLEILFLLLPIAAAYGWYMGRRSIRQNQSNQRKQLSRDYFTGLNFLLSNESDKAVDLFIS
MLDVDDETIDTHLSLGSLFRKRGEVDRSIRIHQNLIARPTLTNEQRDIAMMELGKDYLAA
GFYDRAEEIFINLVSQDDHSEESETQLIAIYQVIKEWQKAIDITKRLSRKRQQVLKPLTA
HFYCQLADEASDDAQKIKLLQQALKQDPQCGRALLTLAKKFLDIQDYAQCKQMLLQLKKA
DIELFADAIPTAKQVYRDTQDKEGFQELLAGAMADGAGASVVVALAQHMISLDEIKAAET
MVLDALYRHPTMKGFQHLMQMHLRQAEEGQAKQSLTMLEQLVEQQIKFRPSYRCKECGFP
SHALYWHCPSCKNWGSIKRIRGLDGE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagatcctctttctgttgcttcccattgctgccgcctatggttggtatatggga
cgacggagcataaggcagaatcaaagtaatcaacgtaaacaattgagccgggattatttt
actggtctcaatttcttactgtcgaacgaatcggataaagccgtcgatttgtttatcagt
atgctagatgttgacgatgaaaccatcgatacccatctgtcactcggttcgctgttccgt
aagcgaggtgaggtcgaccgctctattcgtatccatcaaaatttaatcgcgcggcctaca
ttaaccaatgagcagcgtgacatcgctatgatggagttgggtaaagattatctagcagca
ggtttttatgacagagctgaagaaatctttatcaacttggtcagccaagacgatcacagt
gaagagtctgaaacacagctgattgctatctatcaagtgattaaagagtggcaaaaagcc
attgatatcactaagcgtttgagtcgtaaacgtcagcaagttttaaagccgttaacggcg
catttctattgccagttagccgatgaagccagtgatgacgcgcagaaaattaaactgcta
cagcaagcgctgaagcaagatccccaatgcggtcgtgcattattgaccctagcgaaaaaa
ttcctcgatattcaagattatgcccagtgtaagcaaatgctgctgcaactgaaaaaagcc
gatatcgagctttttgccgatgcgattccaacggctaaacaagtttatcgcgacacgcaa
gataaagaaggctttcaagagttactcgcaggggccatggccgatggtgcgggtgcatca
gtggttgtcgccttagcgcagcacatgataagtcttgatgagattaaagcggcagagacc
atggtgctcgatgcgttatatcgccatccgaccatgaaaggttttcagcacttgatgcag
atgcatttgcgccaagccgaagaagggcaagctaagcagagtttaactatgctagagcag
ctcgttgagcaacaaattaaattccgtccgagttaccgttgtaaggagtgtggttttcct
tcacatgcgctttactggcattgtccttcttgcaaaaattggggcagtatcaagcggatc
agaggcttagacggcgagtaa
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