Shewanella oncorhynchi: RA178_11215
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Entry
RA178_11215 CDS
T09381
Symbol
emrD
Name
(GenBank) multidrug efflux MFS transporter EmrD
KO
K08154
MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_11215 (emrD)
Transporters [BR:
sog02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
RA178_11215 (emrD)
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
TRI12
S10_plectin
Motif
Other DBs
NCBI-ProteinID:
WMB75140
UniProt:
A0AA50KHD7
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Position
complement(2484985..2486217)
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AA seq
410 aa
AA seq
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MSGTPHSPIHHDVAPAASQSSLLLMIVFMVACGQMAQTIFVPALPQIALGLHVDASQLQA
VMACYLLSYGMFQFVYGPVSDRVGRKMPLVVGIAIFVLGAVFAAKATSFNQLIMASLIQG
LGTASAGALCRSIPRDHYFGDRLVKFNSYVSMAVVFLPLLAPFIGSASAAYFGWQAVYWV
LAGFGVAVWLLLIFLFKESLPKTLREHQAVFKSYKHVLHHRAFRAYLFSLIATFAGIAAF
EAIAGVLYGQYLGLTPFMVSCYFVAPIPGYLLGALIAGRQNKPQRVVYQGVALLGAGALF
MLIPGLFNLVVGWSLLIGSILFFSGAGMLFPTLTSAALEPFPRQAGIAGALLGGLQNFGA
GLAALTMSLVPMGGQLSIGLLSAVMVVLVILSLYYAKDQNDTHQNLMPQI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcacgccacattctcctattcatcacgatgtcgctccagcggcgagtcagtct
agcctactgttaatgattgtctttatggtcgcctgtggccaaatggcgcagacgattttt
gtacctgcccttccacaaatcgcactcgggctccatgtggacgccagccaactacaagcc
gtgatggcctgttacttactctcctacgggatgtttcaatttgtgtatggcccagtgtca
gatcgcgttggccgcaaaatgccactcgtcgtgggtatcgctattttcgttctaggcgct
gtattcgcggcgaaggccacaagctttaaccaactgattatggcaagccttatccaagga
ttaggcacagccagcgcaggcgcattatgccgtagcattccccgcgatcattactttggc
gaccgactggtaaaatttaatagctatgtctctatggctgtggtgtttttacctttgctt
gcaccatttatcggcagcgccagtgcagcctatttcggctggcaagccgtatactgggta
ttagcgggattcggtgtcgcggtctggctgttgttaatattcctctttaaagagtcttta
cccaagacgctacgggaacatcaagccgttttcaaatcctataagcatgtcctacaccat
agagcgtttcgcgcttatttattttcattgatcgccacctttgccggtattgcggcgttt
gaagccattgctggtgtactctatggccaatatctcggactgacgccttttatggtcagt
tgctattttgttgcgccaattcctggctacttactgggggcactcatcgcgggccgacaa
aataagccacaaagggttgtttaccaaggtgttgcgttactcggtgctggcgcattattt
atgttgatcccaggtctttttaatttagtggttggctggagtttacttattggatcgatt
ttattcttcagtggcgcaggcatgctattccctaccctaacatctgctgcgttagagcca
tttccacgtcaggcggggattgcgggcgcattactagggggattacaaaattttggtgcc
ggacttgccgcattaactatgtctttagtgcctatgggcggccagttgagcataggttta
ttaagtgctgtaatggtggttttagtgattctgtctctgtattacgccaaagatcaaaat
gatactcaccagaatttaatgccacagatttaa
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