Shewanella oncorhynchi: RA178_11220
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Entry
RA178_11220 CDS
T09381
Symbol
ampC
Name
(GenBank) class C beta-lactamase
KO
K01467
beta-lactamase class C [EC:
3.5.2.6
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog01501
beta-Lactam resistance
sog02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA178_11220 (ampC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RA178_11220 (ampC)
Enzymes [BR:
sog01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.6 beta-lactamase
RA178_11220 (ampC)
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Motif
Pfam:
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
WMB75141
UniProt:
A0AA50Q8B9
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All DBs
Position
complement(2486595..2487779)
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AA seq
394 aa
AA seq
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MHPKAPIALIPLLNGILISAALFSHATAAKTLNTKDIQSIVDSAVKPLMAEYAIPGAVIG
ITIEGKQYFYQYGVSSKTSGQSVTEHTLFEIGSISKTFTATLANYVQGEGKLTLTDMASD
YVPALKGSHFDKISLINLATHTAGDLPMQVPDKVTNNAELMDYLKHWQPSFAAGTHRNYA
NPSIGLLGMIAAQSLGQTFPQVLEQTLFPQLGMTNSYLKVPSNKMADYAQGYDKQDMPVR
VNPGVLADEAYGVKTSAKDLLQFVEANMQMHPLTKPLQTALDETHTGYFDVGMMTQDMIW
EHYSYPIDLNNLLAGHTQEVVFGSTPVKPIVPPLAPQQNVWINKTGSTGGFAAYAAFIPA
KKLGIVLLSNKNTPVPPRVTVGYQILTGIEKLQK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcacccaaaagccccgatcgctttaataccgctattaaacggcatcctcatatctgcg
gccctattctctcatgccactgcagccaaaacacttaataccaaagacatccagtcaatt
gtagattccgcagttaaaccactgatggccgagtatgctattcccggtgcagtaattggc
atcaccatagaaggtaaacagtatttttaccaatatggcgtcagttctaaaacctctggg
caaagtgtgactgaacataccctgttcgagattggctctatcagtaaaacctttaccgca
acactggctaactatgtacagggcgaaggaaaattaacactcacggatatggccagtgat
tatgttccagcattaaaaggcagccattttgataagattagtctcatcaatttagccacc
cacacagcgggagatttgccgatgcaagttcctgataaggtcactaataacgcagagtta
atggattaccttaagcattggcaaccatcatttgccgcggggacccataggaattacgcc
aatccgagtattgggctgcttggcatgattgccgcgcagagtttagggcaaacgtttcca
caagtacttgagcaaacactatttccacaattgggtatgacaaacagctatctcaaggtt
cctagcaacaaaatggccgattatgcccaaggctatgataagcaagacatgccagtgcga
gtcaatcccggtgtattagccgatgaagcctatggcgttaaaacctctgccaaggattta
ctgcaatttgttgaggctaatatgcaaatgcacccgcttaccaaaccactgcaaacggca
ctcgatgagacccacacgggatactttgatgtgggcatgatgacccaagatatgatttgg
gagcattactcatatcctattgatctcaataacttgcttgcaggtcacactcaggaagtc
gtatttggcagtacgccagttaaacctatagtgccgcccctcgcaccgcagcaaaatgtg
tggattaataaaacaggctctactggcggttttgccgcttatgcagcctttattccggcc
aaaaaacttggcattgtactgctgagtaataaaaacacccccgttccgccacgggtcact
gtgggctaccagattttaactgggatcgaaaagttgcaaaaataa
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