Shewanella oncorhynchi: RA178_11815
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Entry
RA178_11815 CDS
T09381
Name
(GenBank) Na+/H+ antiporter NhaC family protein
KO
K18218
tetracycline resistance efflux pump
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_11815
01504 Antimicrobial resistance genes [BR:
sog01504
]
RA178_11815
Transporters [BR:
sog02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RA178_11815
Antimicrobial resistance genes [BR:
sog01504
]
Gene variants
Tetracycline resistance genes
Transporters
RA178_11815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
WMB71139
UniProt:
A0AA50Q1U6
LinkDB
All DBs
Position
complement(2610469..2611851)
Genome browser
AA seq
460 aa
AA seq
DB search
MSEPTALSLIPPLVVLVLAIWLRRPILSLIIGAVTGFLLLDPSQVLNNFASVSLKVMADE
TIGWLILVCGGFGALIALLVRTGGALAFGRNALKLAKGPKSSLLMTFILGIVIFIDDYLN
ALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLSTWAVFFGGLLVDNGVAAEGQ
GIAVYMQAIPYMLYAWLAVAMVLLVALGIVPAIGPMKTAQLRAAQGEPAEAQVDFDQVQT
SDEYAVKAIEEEFKHADNQGKLHNFLVPIGLLVAFTVYFDIDVWKGLLATLVITIPYYAV
QRLMPFSEMMDQMIDGFKSMLPAISTVIAAFVFKDVCDQLLLPQYVIESLSPFMTPKLLP
AVVFLSMAILAFATGSSWGIFAVTIPIVMPLAQAVGADIPLVIGALLSASSFGSQACFYS
DSTVLAAQGSGCNLVSHAVTQLPYALIAAVIAFIGFIVIA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgacagcgttaagtctcattccacctttggtggtattggtgttagctatt
tggttacgccgtcctattttatctttgatcataggtgcggtaaccggtttcctgttactc
gatcccagtcaagtcttaaacaattttgctagtgtgtcattgaaggttatggccgatgaa
accataggttggttgattctggtgtgtggtggttttggcgcgctcatcgcacttttagtt
cgaactggcggcgcattagcgtttggccgcaatgcacttaaattggcgaaaggacctaaa
tcttccctattaatgacttttatccttgggatcgtgatttttatcgatgactatctcaat
gcgttgaccgtgggtgaaaccatgaagcgtgtaacggataaatttaaagtgtcccgtgaa
atgctcgcctatgtcgtggactccaccgccgcgcccgtgtgcgtgttagtgccattatcg
acttgggcggtattttttggtggattactggtggataacggtgtggcagccgaaggtcaa
ggcattgcagtgtatatgcaagccattccttacatgctttatgcttggttagctgtggct
atggtgctacttgtcgcattaggtattgtgcccgccattggtccaatgaagactgcgcag
ctgcgcgctgcccaaggtgaacccgcggaagcgcaagtggatttcgaccaagtgcaaact
tcggatgaatatgcggttaaagccatagaagaggaatttaagcacgccgataatcagggc
aaactgcataactttttagtgcctattggtttgttagttgcctttaccgtgtactttgat
atcgacgtgtggaaaggcttgctggcgaccttagttatcacgattccttattatgcagtg
cagcgcttgatgccattttcagagatgatggaccaaatgatcgatggctttaaaagcatg
ctaccggccattagcactgtgattgcggcgtttgtatttaaggatgtgtgcgatcagttg
ttactgccgcagtacgtcattgaatcattaagcccatttatgacacctaaattgctgcct
gcggtagtgttcttatctatggctatactcgcatttgccacaggttcgagctggggtata
tttgccgtgacgattcctatcgtgatgccattagcgcaagcggttggggcggacatccca
ttagtcattggggccttattgtctgcatcatcatttggtagccaagcgtgcttctactca
gattcaaccgtattggccgcccaaggctcaggttgtaacttagtgagccatgctgtgact
cagttaccttatgcacttatcgcagcagtaatagcatttatcggctttattgtgattgca
taa
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