Shewanella oncorhynchi: RA178_12625
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Entry
RA178_12625 CDS
T09381
Symbol
asnS
Name
(GenBank) asparagine--tRNA ligase
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RA178_12625 (asnS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sog01007
]
RA178_12625 (asnS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sog03016
]
RA178_12625 (asnS)
Enzymes [BR:
sog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
RA178_12625 (asnS)
Amino acid related enzymes [BR:
sog01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RA178_12625 (asnS)
Transfer RNA biogenesis [BR:
sog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RA178_12625 (asnS)
Prokaryotic type
RA178_12625 (asnS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
CDC48_2
Motif
Other DBs
NCBI-ProteinID:
WMB71282
LinkDB
All DBs
Position
2801954..2803354
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AA seq
466 aa
AA seq
DB search
MSIASVASVFKGEHAVGSKVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLDN
YDNEVLKLTAGCSVVMTGDVVESPGAGQAFELQVTELEVAGWVDDPDTYPMAAKRHSIEH
LRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVS
TLDMENLPRTEAGKVDYDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNT
SRHLAEFWMVEPEVAFANLNDIAGLAEAMLKYAFNAVLTERMDDLTFFAQHVDKTVIDRL
QSFVSSDFAQVDYTDAVEILQNCGRTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYP
KDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLAEMDLNQEDYWWY
RDMRRYGTVPHAGFGLGFERLVSYVTGVNNIRDVIPFPRAPRTANF
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgcatctgtcgcatctgtatttaaaggtgagcacgccgtcggttctaaagtc
acagtgcgtggctgggtcagaacccgtcgtgactctaaagccggcatctcttttttagct
gtttacgacggctcttgctttaatcctatccaaggtgtcgtgcccaatagcttagataat
tacgacaacgaagtgttaaagctgactgcgggttgttctgttgtgatgacaggcgacgtg
gtggaatctcctggtgcaggccaagcatttgagctgcaagtgactgaacttgaagtcgct
ggctgggttgatgatccagacacttacccaatggccgctaagcgtcattcaattgaacat
ttacgcgaattagcgcacttacgcccacgtactaacattattggtgccgttgcccgcgta
cgtaactgtctatcccaagcgattcaccgcttctaccacgaagaaggctttatttgggta
tcgaccccacttatcacagcatcagattgcgaaggcgccggtgagatgttccgcgtatcg
accttagatatggaaaacctgccgcgtactgaagcgggtaaagtcgattacgataaagat
ttcttcggtaaagaagctttcctgaccgtatcaggccagttgaatgctgaaacctacgcc
tgtgcactgtcaaaagtatatacctttggcccgactttccgtgctgaaaactcaaacact
agccgccacttagcggaattctggatggttgagcctgaagtcgccttcgctaacttaaac
gacatcgcaggccttgccgaagctatgttgaaatacgcattcaatgcagtcttgactgag
cgtatggacgatttaactttcttcgcccagcacgttgataagactgtgatcgaccgtctg
caatctttcgtttcaagcgattttgctcaagtggattacacggatgcggttgaaattctg
caaaactgtggcagaaccttcgagttccctgtgtcttggggtatcgatttatcttctgag
catgagcgttacttagccgaagaacacttcaaagcccctgtggtagtgaagaactatcca
aaagatatcaaagccttctacatgcgcttaaacgatgacggtaaaactgttgccgcgatg
gacgtgttagccccaggtatcggtgagatcatcggtggctctcaacgtgaagagcgttta
gacgtgctagatatgcgtctagccgaaatggatctgaaccaagaagattactggtggtac
cgtgatatgcgccgttatggcacagtgccacatgcaggttttggtctagggtttgagcgt
ttagtatcttacgtgacgggcgtgaacaacattcgtgatgttatccctttcccacgtgca
ccgcgcactgcgaacttctaa
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