Shewanella oncorhynchi: RA178_12770
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Entry
RA178_12770 CDS
T09381
Name
(GenBank) ATP-binding protein
KO
K07645
two-component system, OmpR family, sensor histidine kinase QseC [EC:
2.7.13.3
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog02020
Two-component system
sog02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA178_12770
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA178_12770
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sog01001
]
RA178_12770
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sog02022
]
RA178_12770
Enzymes [BR:
sog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RA178_12770
Protein kinases [BR:
sog01001
]
Histidine kinases
OmpR family
RA178_12770
Two-component system [BR:
sog02022
]
OmpR family
QseC-QseB (quorum sensing)
RA178_12770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
HisKA
2CSK_N
HAMP_PhoQ
HATPase_c_2
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WMB71310
UniProt:
A0AA50K9Y7
LinkDB
All DBs
Position
complement(2843302..2844699)
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AA seq
465 aa
AA seq
DB search
MIRLKGLDVYSLRLVLTLLILSGISVSVAVSSWLSTRDSKHQIEELFDAQMLQTAKMLEL
FYHTEPDATAQDLVIPQVLHVPDSQISSFAEKADALKLAYEHKLAFQIWSEAGEALVLSD
NIGHQPISRFVQGYHKKVFEGELWHVFSFFSVKNHVWIVTAQQDEVRQELVSQIMHNAVI
VPLMVVPLTLIIVSFLFYLLFRPLKTFERELIGRAPNDLTPLTMSLPKELVPVRRALNLY
INSIARFIARERRFSADAAHELKTPLSVIKLHQHGLESLIDDDPQQKFHLAAIDAGVVHM
SHTVEQLLVLARVDSINELNVSSHAILPMVEDALNQLMPQITDYEWNIDIGSNLTVTCDR
FYLLLVLKNIIENACKYSPQESEISVSAHALDDEICICVADRGQGMTEPQIANATERFYR
VNENEGIGAGLGLSICYHIIELHQGRLVIAPRDQGGLSVTLFLPK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgattcgattaaaggggctagatgtgtattcactgcgtttggtactgacattattaatt
ttgtcaggtatttcagtatccgtcgctgtgtctagctggttgagtactcgggattctaag
catcaaatcgaagaactcttcgatgcgcaaatgctccaaaccgctaaaatgttggagttg
ttctatcatactgagcccgatgcaacagctcaggatctcgtcataccccaagtgctccac
gttcccgatagccagatcagttcctttgccgaaaaggccgatgcgctgaaactggcctat
gagcataaattggcgtttcaaatctggagtgaggcgggtgaagccttagttttatcggat
aatattggtcatcaacctatcagtcgattcgtacagggttatcataagaaagtgttcgaa
ggagaactctggcatgtgttcagttttttttcggttaaaaatcatgtttggattgtcact
gctcaacaggatgaagtacgccaagagctcgtatcgcaaatcatgcataacgccgttatc
gtgcctttaatggtagtgcctttaacattaattattgttagcttcttgttttatctcttg
tttcggccattaaaaacctttgaaagagaattaattggacgggcgcccaacgatttgacc
ccgttgactatgtcattgcctaaagaattagtccctgttcggcgcgcattgaacttatat
atcaatagtatcgcgcgatttatcgcccgtgagcgtcgttttagcgccgatgcggcccat
gagcttaaaacgccattatctgtgattaaattacatcaacatggcttagagagtctgatt
gatgatgatccgcagcagaaattccatttagctgcgatagatgctggcgtagtgcacatg
agtcataccgttgaacaattactcgtattagcaagggtggactcgattaatgagcttaat
gtgtcatcccacgccattttgcctatggtcgaagatgcgcttaatcaattaatgccacaa
atcacagattatgaatggaatatcgatatcggatccaatctaacggtgacctgtgatcgt
ttttatttgctacttgtactgaagaatattatcgaaaatgcctgtaaatacagtccacag
gaatcggagatttcagtgtcggcccatgctttggatgatgaaatctgtatttgtgtcgcg
gatcgaggccaaggcatgacagagccgcagattgccaatgcgacagaacgtttttatcgt
gtgaatgaaaatgaaggcataggtgcgggattaggtttgtctatctgctatcacatcata
gaattgcaccaaggtcgtttagtgattgcgcctagggatcaaggtggattatctgtgaca
ctttttctgccaaaatag
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