Shewanella oncorhynchi: RA178_12840
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Entry
RA178_12840 CDS
T09381
Symbol
hypD
Name
(GenBank) hydrogenase formation protein HypD
KO
K04654
hydrogenase expression/formation protein HypD
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99975 Protein processing
RA178_12840 (hypD)
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GFIT
Motif
Pfam:
HypD
DUF6506
Motif
Other DBs
NCBI-ProteinID:
WMB71324
UniProt:
A0AA50KA09
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Position
2858885..2860024
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AA seq
379 aa
AA seq
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MLELKHLYQGFRDPQTIANLARDIRLTAKLVKQQINIMEVCGGHTHTIMKYGLLDLLPDN
IEFIHGPGCPVCIMPKERIDQAAALASQENVILVTLGDMIRVPGSQGSLASFRAKGCDIR
PIYDPLDTLKIARDNPDKTVVFFAIGFETSTPMTAILLQLAEQEKLENLLFHINHVLVPP
AIDAVMHDPKARVNAFIGPAHVSVISGAKIYCSTVENYGTPVVVAGFEPVDVMESILRIV
RQKAAGKAELDIQYSRAVSQDGNLTAQAKVNQFFNVRPQFRWRGLGPIPNSALQLKPEYA
HRDAELRFKDRLPVKEIDDHKACQCGDILRGLAKPKDCKVFGRGCNPETPLGSCMVSSEG
ACNAYYRYQGIDIKEPHHG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaactaaaacacctctatcaaggctttcgcgatccccaaacgattgccaattta
gcacgggatattcggttaaccgctaaattggttaagcaacaaatcaatatcatggaagtc
tgtggcggccatactcatacgattatgaaatacggcttgctagatttactgccagataat
attgaatttatccatggtcctggctgcccagtgtgcattatgcctaaagagcgcatcgac
caagccgcggcgcttgcctcccaagaaaatgttattcttgtgaccctgggcgatatgatc
cgcgtgcccggttctcaaggctctttagccagttttagggccaagggctgcgatattcgc
ccaatttacgatcccttagatacgctcaaaattgcccgcgacaatcccgataaaaccgta
gtgttcttcgccattggctttgaaacctcaaccccaatgacagcaattttgttacaactg
gccgaacaagaaaaactcgaaaatctactgtttcatatcaatcatgtattagtgccaccc
gcaattgatgccgtgatgcacgacccaaaagcgagggtcaacgcctttatcggcccagcc
catgtgagcgtgatcagtggcgcaaaaatctattgcagcacagtcgaaaactatggcacg
cccgtagtggtggcgggatttgagcccgtcgatgtgatggagtccattttgcggattgtg
cgccaaaaagccgcgggcaaagctgagctcgatatccaatacagccgcgcggtatcacag
gacggcaacctcacggcgcaggccaaagtaaatcaattcttcaatgtcagaccgcaattt
cgctggcgtggcctaggcccaatccccaattcagcgctgcagcttaaacccgaatatgcc
cacagggacgccgaactgcgctttaaagaccgcctacccgtgaaggaaattgacgatcat
aaagcctgccagtgcggcgatatacttcgtgggcttgctaaaccaaaggactgtaaagtt
tttggccgcggctgcaatcccgaaacgcccttaggcagttgcatggtcagctccgaaggt
gcctgcaatgcctattaccgctatcaaggtatcgatatcaaggagccacatcatggctga
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