Shewanella oncorhynchi: RA178_12865
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Entry
RA178_12865 CDS
T09381
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RA178_12865 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sog01007
]
RA178_12865 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sog03016
]
RA178_12865 (pheT)
Enzymes [BR:
sog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
RA178_12865 (pheT)
Amino acid related enzymes [BR:
sog01007
]
Aminoacyl-tRNA synthetase
Class II (U)
RA178_12865 (pheT)
Transfer RNA biogenesis [BR:
sog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RA178_12865 (pheT)
Prokaryotic type
RA178_12865 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
HTH_MCM7
Motif
Other DBs
NCBI-ProteinID:
WMB71329
UniProt:
A0AA50KAG7
LinkDB
All DBs
Position
complement(2862886..2865273)
Genome browser
AA seq
795 aa
AA seq
DB search
MKFSESWLREWVNPSVSREALSHQITMAGLEVDDVEAVAADFSGVVIGEVVECGQHPDAD
KLRVTKINVGGSELIDIVCGAPNCRQGLKVAVAMVGAVLPGDFKIKKAKLRGMPSEGMLC
SYSELGINVESDGIIELPLDAPLGTDIRDYLQLNDAVIDVDLTANRADCLGMAGLAREVG
VLNRQTVVEPQWQAVTPTTDAQVTINVNAPAACPRYLGRVVKNVNVKAPTPLWMQEKLRR
SGIRSIDPIVDITNFVLIEFGQPMHAFDLAKLTGDIQVRLGTSEEKITLLDGSEVTIPSD
TLVIADDVRPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTDSSHRF
ERGVDPEMQHKVIDRATRLVLDICGGEAGPVVEAKSEADLPKPAQIVLRRSKLDRILGHH
VPDSDVVEILQRLGFSVVVGQDSWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNTAPV
AALRMSDHKESDLSLKRVRALLVARGFQEAVTYSFVDPKLQNLVHPGLDAMVLPNPISSE
MSAMRLSMFTGLLAAVGYNQSRQQSRVRLFETGLRFVPDITAESGVRQQAMLACVITGLQ
NDEHWAMESKTVDFFDLKGDLEAIIGLTVSASEFSFRGATHSALHPGQCAEILRNDRVIG
HIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQAVSKFPANRRDIAVVVDESVSA
GDVMKLIRKVGENQLVGINLFDVYLGKGVEPGKKSLAIALTLQDTTRTLEEKEIAETVGS
VVSALKSEFNASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagcgaatcttggcttcgtgaatgggtaaacccttcagtcagccgtgaagca
ttatcccaccagatcactatggccggtctcgaagtcgatgacgttgaagccgtagctgcc
gattttagcggtgtagtgattggtgaagtggttgagtgtggtcagcatcccgatgccgat
aaactgcgcgtgaccaaaatcaacgttggtggtagtgaacttatcgatatcgtctgcggt
gcaccaaactgccgtcagggtcttaaagtggccgtggctatggttggcgccgtattacct
ggcgatttcaaaatcaagaaagccaagctgcgtggcatgccatcagaaggcatgttgtgc
tcgtacagcgagcttggcattaacgtcgaaagcgatggcattatcgaattgccattggac
gcgccattaggcactgacatccgcgactatctgcaacttaatgatgccgttatcgatgtg
gatttaacggctaaccgtgccgattgcttaggtatggcaggtcttgcccgtgaagtgggc
gtgttaaaccgccaaacagtggttgagccacagtggcaagccgttacgccaacgacagat
gcacaggtcacgattaacgttaacgcgcctgcagcgtgtccacgttacttaggccgtgtg
gttaaaaacgttaatgtgaaagcgcctacgccattatggatgcaggaaaaactgcgccgt
agcggtattcgctctatcgatcctatcgtagacatcactaactttgtgttgattgaattc
ggtcaacctatgcacgctttcgatcttgccaaattaacaggcgatatccaagtgcgttta
ggcactagcgaagagaaaatcaccctgcttgatggcagcgaagtgaccatcccaagcgat
accttagtgatcgccgatgatgtgcgtccattagcccttgctggtgtgtttggcggcgaa
tattcaggcgtgagcgacacgacccaagacatactgcttgaatgtgccttcttcgcgccg
ctcgccattatgggtaagtcacgtcgtttaggtttgcacacagattcatcacaccgcttt
gagcgtggtgttgaccctgagatgcaacacaaggttatcgaccgtgctacgcgtttagta
ctggatatctgtggcggtgaagctggccctgtagttgaggctaaatcagaggctgattta
cccaaacctgcacaaatcgttttacgtcgcagcaagttagatcgaattttaggtcatcat
gtacctgatagcgatgtcgttgaaatcctacaacgtttaggttttagtgtggttgttggc
caagatagttggcaggtcactaccgcgacttatcgttttgatatggcgattgaagaagat
ttgatcgaagaagttgcccgtatttacggttataacaatatcccgaatacggcgcctgtt
gctgcgctgcgtatgtcagatcataaagaatctgacttaagcctaaaacgcgtgcgtgcc
ttattggtcgctcgtggtttccaagaagcggtaacctacagctttgtcgatccaaaattg
caaaatctggttcatcctggtttagacgctatggtgttaccaaacccaatttccagtgaa
atgtcggccatgcgcctgtcaatgttcaccggtttattggccgccgttggctacaaccaa
agtcgtcaacagagtcgcgtgagactttttgaaactggtctgcgctttgttcctgatatc
actgcagaatccggtgtaagacagcaagcaatgctcgcttgtgtcattactgggctccaa
aatgatgaacattgggctatggaatcgaaaactgttgattttttcgaccttaaaggtgat
ttagaagcaattatcggcttgacagtttccgcatcagaatttagctttagaggagcgacg
cattctgctctccatccggggcaatgtgctgaaatattgagaaatgatcgagtgatcggt
catataggtgcaatccatcctagtttggagaagccttttggactcaatggtaaaaccatc
gtttttgagttggaattggatgctttattgcataccagtttgccgctagcccaagctgta
tctaagtttccagctaatcgtcgtgacatcgcagtcgtagtagatgagagtgtatctgca
ggtgatgtaatgaaattgataagaaaagttggcgaaaatcagttggttggcataaacttg
ttcgatgtatacttaggtaaaggtgttgaacctggcaagaagagcctggcgatagcactt
acattacaagacactactcgtacgcttgaggaaaaagagattgctgagaccgttggttca
gtcgtttctgcccttaagtccgagttcaacgcatcgttgagggattaa
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