Shewanella oncorhynchi: RA178_12870
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Entry
RA178_12870 CDS
T09381
Symbol
pheS
Name
(GenBank) phenylalanine--tRNA ligase subunit alpha
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RA178_12870 (pheS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sog01007
]
RA178_12870 (pheS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sog03016
]
RA178_12870 (pheS)
Enzymes [BR:
sog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
RA178_12870 (pheS)
Amino acid related enzymes [BR:
sog01007
]
Aminoacyl-tRNA synthetase
Class II (U)
RA178_12870 (pheS)
Transfer RNA biogenesis [BR:
sog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RA178_12870 (pheS)
Prokaryotic type
RA178_12870 (pheS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
Phe_tRNA-synt_N
tRNA_synthFbeta
Motif
Other DBs
NCBI-ProteinID:
WMB71330
UniProt:
A0AA50KAF1
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All DBs
Position
complement(2865289..2866272)
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AA seq
327 aa
AA seq
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MQQLTEIVEQALVIIDQASDLKALDDIRVDYLGKKGKITDMMKMMGSLSPEEKPAFGQAV
NDAKQAIQQKLTERIDGLKSSELEAKLIAEKIDVTLPGRTQEIGGLHPVTRTIERIETFF
GELGFSVKQGPEIEDDFHNFDALNISEHHPARADHDTFYFNPKLMLRTQTSGVQIRTMET
EKPPLRIISPGRVYRNDYDQTHTPMFHQVEGLLVDEHVNFAELKGILHDFLRNFFEEDLQ
VRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPEKYSGFAFGMGVE
RLTMLRYGVNDLRAFFENDLRFLKQFK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagttaactgagatcgtagaacaagccttagtcattattgaccaggccagtgat
ctaaaagcactggatgatatccgtgtcgattaccttggtaagaaaggtaagatcaccgac
atgatgaaaatgatgggtagcttaagccctgaagaaaagccagcctttggccaagcggtc
aatgatgctaaacaggcgattcaacaaaaattaactgagcgtatcgatggtctgaaaagt
tcggaattggaagccaaattaatcgccgaaaagattgatgtgactttgccaggccgcacc
caagagatcggtggcttacatcctgtgactcgaaccattgagcgcatcgaaacctttttc
ggggaattagggttctcggtaaagcaggggcctgaaattgaagatgatttccacaatttc
gacgcactgaatatctctgagcaccatcctgcgcgtgctgatcatgataccttttatttc
aatcctaaactgatgctgcgtacccaaacttcgggcgtgcaaatccgtactatggaaact
gaaaagccaccattacgcattatttctcctggtcgtgtttatcgtaacgattacgaccaa
actcacacgcctatgttccaccaagtggaagggttgttggttgatgagcatgttaacttt
gctgaattgaaaggcattttgcatgacttcctgcgtaatttcttcgaagaagatctgcaa
gtgcgtttccgtccatcttacttcccattcactgaaccttcagcggaagtggacgtgatg
ggcaaaaatggtaaatggctagaagtgcttggctgcggtatggtacatccgaatgtgctg
cgcagcgttggcatagatccagaaaaatactctggttttgcttttggtatgggtgtcgag
cgcttaactatgttgcgttacggcgtaaacgatttacgtgcgtttttcgaaaacgaccta
cgtttcctgaagcaatttaaataa
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