Shewanella oncorhynchi: RA178_13295
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Entry
RA178_13295 CDS
T09381
Name
(GenBank) hemolysin family protein
KO
K03699
magnesium and cobalt exporter, CNNM family
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_13295
02042 Bacterial toxins [BR:
sog02042
]
RA178_13295
Transporters [BR:
sog02000
]
Other transporters
Pores ion channels [TC:
1
]
RA178_13295
Bacterial toxins [BR:
sog02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Other
RA178_13295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNNM
CorC_HlyC
CBS
Colicin_V
Motif
Other DBs
NCBI-ProteinID:
WMB71412
UniProt:
A0AA50KAG1
LinkDB
All DBs
Position
complement(2948901..2950217)
Genome browser
AA seq
438 aa
AA seq
DB search
MEIFILIGLIVLNGLFAMSEIAIVTARKSRLTALAHGGSSTAKAALKLAEDPTQFLSTVQ
IGITSIGILNGIFGESILAEPLSLWLQTFGLSPDLTNIFSTVLVVIIVTYVSIVIGELVP
KRIGQVSAESIACLMAKPMVFLAIATKPFVWMLSGSTHALMRLMGFSHRLDDNVTQEDIQ
AMLQEGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQS
PHSRFPVCRNNVDDMVGIISAKQLLSQSIAGERLELVDLVKNCNFVPNSLSGMELLEHFR
TTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFFQEDVNDQMVIKREDGSLLLDGLIPIF
DLKDALGIKQLPNEEDGRYQTLNGFLMYELGKIPQTTDIVEVAGWRLEIMDMDGKRVDKV
LAQMLPDADSSEESIFVD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttttattcttattggtttgattgtgttaaatggcttatttgctatgtcggaa
atcgccattgtgactgctcgcaagtcacggctaactgcccttgctcatggcggtagcagc
actgctaaagcagcactcaaactggcagaagatccaacgcaattcttgtcaactgtgcag
ataggcataacatcaatagggatcttaaacggaatatttggtgaatccatcctcgccgaa
cctttgtcactttggcttcagacttttggtctaagtccagatttaaccaacatcttttca
accgttctagtggttatcattgtcacttatgtgtcaattgtcattggtgagttagttccc
aagcgaattggtcaagtcagtgcggaaagtattgcctgtctaatggctaaaccaatggta
tttctagcaatagcaaccaaaccatttgtatggatgttatccggttcaactcatgctctt
atgcgtctaatgggattttcgcatagacttgacgacaatgtgactcaggaagatattcag
gcaatgttgcaggaaggctcatctgcaggggtgattgagcacaatgaacatgcgatggtt
aaaaacgtttttcgattagatgaacgtactatttcttctttgatggtgccacggtctgat
attgtatttctcgacttaaacctgcctcttgatgcaaatctgcgaactgttatgcagtct
cctcactcacgatttcctgtttgtcgtaacaatgttgatgatatggtgggtattatttca
gctaaacaactcctttcacagtctatcgcgggtgaacgtttagaattggtggatctcgtt
aagaattgtaactttgtacccaacagcttatctggaatggagctacttgagcattttcgt
actacaggctcgcagatggtgtttgttgttgatgaatatggtgatttgaaagggctggta
acgcttcaagatatgatggatgcactgactggtgagttttttcaggaagatgtgaatgat
cagatggtgataaaaagggaagatggctcattattactagatggtctaatccctattttt
gacctaaaagacgctttaggtataaagcaattgccaaatgaagaggatgggcgttatcaa
acgctaaatggatttttaatgtatgaattagggaaaatacctcaaaccacagatattgtt
gaagttgcaggttggcgactcgaaattatggatatggacggtaaaagggtagataaagtc
cttgctcaaatgttacctgatgctgattcttcagaagaatctatatttgttgattga
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