Shewanella oncorhynchi: RA178_13915
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Entry
RA178_13915 CDS
T09381
Symbol
rlmA
Name
(GenBank) 23S rRNA (guanine(745)-N(1))-methyltransferase
KO
K00563
23S rRNA (guanine745-N1)-methyltransferase [EC:
2.1.1.187
]
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sog03009
]
RA178_13915 (rlmA)
Enzymes [BR:
sog01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.187 23S rRNA (guanine745-N1)-methyltransferase
RA178_13915 (rlmA)
Ribosome biogenesis [BR:
sog03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RA178_13915 (rlmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RlmA
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_32
Methyltransf_23
MTS
Methyltransf_4
CMAS
MetW
Methyltransf_9
Methyltransf_33
Methyltransf_36
FtsJ
NpmA
Methyltransf_29
PCMT
Motif
Other DBs
NCBI-ProteinID:
WMB71521
LinkDB
All DBs
Position
complement(3080091..3080906)
Genome browser
AA seq
271 aa
AA seq
DB search
MHYLCPLCAAPLTLTERTWGCSQQHKFDMAKEGYVNLLPVQKKNSKDPGDNKQMMFARRE
FLNAGYYQGLSDRVNELALEFGAEAKQILDIGCGEGYYSQRLFHVLSQHHDCNLQGIDIS
KSAIKYAAKRYPNLQFCVASAYEMPIASQSVDLAIRIYAPSKVEELQRIMADGGLLITVS
PGPLHHFALKQQIYAEPRLHPVSTAHIAGFECLHQERLISQLELANSEHIAHFLEMTPYA
WKFTHAQKQAFALQGLNCELDFQIEVHRISK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcattatttatgtcccctgtgtgccgccccactgacgttaacggagcgaacttggggt
tgttcgcagcaacataagtttgatatggccaaagaaggctatgtcaacttattacctgta
cagaagaaaaactcaaaagatcctggtgataataaacagatgatgtttgctcggcgtgaa
tttttaaacgcgggttactatcaaggtttgagtgatagagtgaatgagctcgcgcttgag
tttggtgccgaagcaaaacaaatccttgatataggctgtggggaagggtactacagtcaa
cgtttattccatgtgttgagccagcaccatgattgcaatttacaaggtatagatatctct
aagtctgcaattaaatatgcagctaaacgttaccctaatttgcaattttgtgtcgcaagt
gcctatgaaatgccaatcgcatcccaaagtgtcgatcttgccattcgtatttatgccccc
tcaaaagtagaagagttacaacggattatggctgatggaggcttactgataacggtttct
ccgggacctttacaccattttgcgttgaaacaacaaatttatgctgagccaagattacac
cccgtttccacagcgcatattgctggatttgagtgtcttcatcaggagcgcttaatctcc
cagttagaactggcaaacagtgaacatattgctcattttttagaaatgacgccctatgct
tggaagtttactcatgcccaaaagcaagcatttgcgttgcaagggctgaactgtgaattg
gatttccaaattgaagtgcatcggatttcaaagtaa
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