Shewanella oncorhynchi: RA178_14140
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Entry
RA178_14140 CDS
T09381
Name
(GenBank) peptidoglycan DD-metalloendopeptidase family protein
KO
K19304
murein DD-endopeptidase [EC:3.4.24.-]
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sog01002
]
RA178_14140
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sog01011
]
RA178_14140
Peptidases and inhibitors [BR:
sog01002
]
Metallo peptidases
Family M23
RA178_14140
Peptidoglycan biosynthesis and degradation proteins [BR:
sog01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
RA178_14140
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
Csd3_N2
LysM_OapA
NMB0315_dom_I
Myosin_VII_N
Motif
Other DBs
NCBI-ProteinID:
WMB71564
UniProt:
A0AA50KAF8
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Position
complement(3126442..3127743)
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AA seq
433 aa
AA seq
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MQTGKPNFINLSQTRLQNLSSTQKNILLMGSLLMGAAMLMPNNNHVTPTAQRIPVVLDIE
NILPQVSEPEVLDQAALINNAPQFERIIVSGDTLSGLFSKAGVDQQTMYKVLEADLNILA
LDTLLPGNRMQFWLDSEGQLQKLELYFNAARQVVFTRYEDGSFNVEEVNVEGVWQNRILT
GDIKGSFYVSAQKMGLAAADIQRIEDLLKEKLNFARDLRAGDKFSVLVNDQYVEGEPTGS
SQILGVSIKSGRSEISAYQYSDGSYYDAKGQSLVRAFQRYPLAKQPRMSSRFNSHRKHPI
TGRISPHNGTDFSVPIGTKVVAPGDGIVSLVTDHQFAGKYIVIEHGGKYRTRYLHLSKAL
VRKGQRVTRGQVIALSGNTGRSTGPHLHYEFHINGKPVDPLKADIPMSSKLANQDLRTFT
NMVKSREAIMNLG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaacaggcaaacccaactttatcaacttatcgcaaacccgtttgcagaacttatca
tcgacccaaaagaacattctattaatgggtagtttgttgatgggtgctgctatgttgatg
ccgaataataaccatgttacgccaactgctcagcgtatccctgttgttctcgatattgaa
aatattctccctcaagtttctgaacctgaagtcctagatcaagctgcactcattaataat
gctccccagtttgagcgaattatcgtttccggtgataccttaagtgggttattttccaag
gcgggtgttgatcagcagactatgtataaggttttagaagctgatttaaacattttggca
cttgataccctgttacctggtaacagaatgcaattttggcttgatagtgaaggccagtta
caaaaattagaactttattttaacgctgcccgccaagtggtttttacgcgttatgaagac
ggtagttttaatgttgaagaagtgaacgttgaaggtgtttggcaaaatcgaattttgact
ggcgatattaaaggttctttctacgtttcagcccaaaaaatgggcttagccgctgcagat
attcagcgaattgaagatttactcaaagaaaaattgaattttgcccgtgatttacgagct
ggcgacaaattctcagttttggtaaatgatcaatatgttgaaggtgaaccgacgggaagt
agccaaattttaggcgtcagtattaaaagtggccgttctgaaattagtgcatatcaatat
tctgatggtagttattatgatgctaaaggtcagagtttagttcgggcattccaacgttat
ccgttagctaaacaaccgcgtatgagttcacgttttaacagccatcgcaaacacccaatc
acagggcgtatttctccccataatggaacagacttttctgtgccgatcgggactaaagtt
gttgcacctggtgatggaattgtcagtttagtgacggaccatcagtttgctggtaagtat
attgtgattgaacatggtggtaagtaccgtacccgttacctacatttgtctaaggcgtta
gtgcgtaaaggtcaacgtgtaactcgcggtcaagtgattgctttatctggtaatacaggt
cgttcgactggcccgcatttgcattatgaattccatatcaatggtaaacctgttgatccg
ttgaaagccgatattcctatgtcgagcaagttagcgaatcaagatttacgcacattcact
aatatggtgaagagtcgtgaagctataatgaacttaggttag
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