Shewanella oncorhynchi: RA178_14150
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Entry
RA178_14150 CDS
T09381
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sog03400
]
RA178_14150
DNA repair and recombination proteins [BR:
sog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RA178_14150
Archaeal homologous recombinant proteins
RA178_14150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WMB71566
UniProt:
A0AA50KBW0
LinkDB
All DBs
Position
complement(3131060..3132205)
Genome browser
AA seq
381 aa
AA seq
DB search
MKFIHTSDWHIGRQLHNQSLLDDQAFVLEQIIALADEHKVDAVIVAGDIYDRSIPPANAV
ALLDDVLNRLVHDLGLQVIMIAGNHDGHERLGFAAKQMAASGLHIIGPLSADIHPITLSS
SSGDVVFYPLPYAEPATVRQVFECEAASHEAAMTLLLEQVHQHDSQGLPKVVISHCFLDG
GSESESERPLSIGGADKISPTLFTEFDYVALGHLHGPQYKGAEHVRYSGSILKYSFSEQH
QHKSVTLVELSAKTPANIRLLPLTSIRDVRILEGELATLLAHGKTDIKREDYLMVRLLDK
HAILDAMGKLRAVYPNVLHLERTGLMAGQQQVTLSRDHIKKGEMDMFRDFFSQVSGESLT
QAQQAVMDELLTKLHNEEHQA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccacacctcggactggcacataggtcgtcaattacacaatcaatcacta
ctggatgatcaagcctttgtgctcgagcaaattattgctctagcggatgaacacaaggtg
gatgccgtgattgtggcgggggatatttatgacagatcgattccgcctgcgaatgcggtc
gcgctgttagatgatgtgcttaaccgcttagtacatgatttaggtctgcaagtcattatg
attgcgggtaatcacgatggtcacgagcgcttaggttttgcagcaaaacaaatggcggca
agtgggttacatattattggccctttgagtgctgacattcatcccattactttgtcgagt
tcaagcggtgatgtggtgttttatcccttgccctatgccgaacctgccacagtgcgccaa
gtttttgagtgtgaggcggcaagccatgaggccgcaatgacgctattgcttgaacaagta
caccagcacgatagccaaggtttgccgaaagtggtgataagccattgttttttggatggt
ggcagtgagtcagaatctgagcgaccactgagcattggtggcgccgataaaatatcgcca
acgctatttactgagtttgattatgtcgcccttgggcatttgcacggaccgcaatacaaa
ggtgcagagcatgtgcgctactcaggatcgattttgaagtattcctttagcgaacaacat
caacataagtcggtgaccttagtcgaacttagtgcaaaaacgccagcaaatatccgctta
ttgccattaacgtcgatacgcgatgtccgcatcttagaaggggagttagccacattactc
gcccatggaaaaacggatatcaagcgtgaggactaccttatggtcagactccttgataaa
catgccattttagatgctatggggaaattgagagccgtttaccctaatgtgctgcattta
gagcggactggtctgatggcggggcagcaacaagtcaccttgagccgagatcatatcaaa
aaaggcgagatggacatgttccgtgactttttctctcaagtgtccggcgagtcattaaca
caagcacagcaagccgtgatggatgaactcctgactaagctacacaatgaggagcaccaa
gcatga
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