Shewanella oncorhynchi: RA178_14315
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Entry
RA178_14315 CDS
T09381
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sog03000
]
RA178_14315 (pspF)
Transcription factors [BR:
sog03000
]
Prokaryotic type
Other transcription factors
Others
RA178_14315 (pspF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA
bpMoxR
AAA_16
HTH_Tnp_ISL3
HTH_28
AAA_7
HTH_23
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WMB71597
UniProt:
A0AA50KBG5
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All DBs
Position
3165479..3166570
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AA seq
363 aa
AA seq
DB search
MDNKFQQDNLIGQSNALLEVLEHVSQIAPLSKPVLIIGERGTGKELIAERLHYLSKRWDQ
SFIKLNCSSLSENLLESELFGHESGAFTGAKGKHEGRFERADGGTLFLDELANTSGLIQE
KLLRVIEYGEFERVGGSKTVQADVRLICAANEDLPSLADAGEFRADLLDRLAFDVITLPP
LRCRPEDIMTLAEYFAVGMARQLKLQLFSGFSAHAVEQLMTHDWPGNIRELKNVVERSVY
RNGGENRPIDHITLDPFASPYRPKTRIKTRERQITSVTPTTVASTPQSAPTFEAEVQVNT
EYSTNCFNFPLDFKEQTEQYEMDLIQQALSNSQYNQKKTADMLGLSYHQLRGILKKYNLL
DKA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtggataataaatttcagcaagacaacctcatcggtcaatccaacgccctactcgaagtg
ttagaacatgtgtcgcaaatagcgcctctgtctaaacccgtactgattattggtgaacgt
ggtacaggtaaagagcttattgccgaacgcttacattatctgtctaagcgctgggatcaa
agttttattaagctaaactgttcatctttgagtgaaaatttactcgagagtgaattattt
ggccatgagtcaggagcctttactggcgccaaaggcaaacacgaaggccgctttgagcgc
gccgacggcggcaccttattcctcgacgaattagccaacacctcaggacttatccaagaa
aagctcctgcgcgtcattgaatatggcgaatttgagcgggtcggcggcagtaaaaccgtg
caggctgatgttcgtttaatctgcgccgccaacgaagatttaccatcacttgctgacgca
ggcgaatttcgtgccgacttgctcgatagactcgccttcgatgtaattactctgccacca
ctgcgttgccgcccagaagacataatgacgctggcggaatatttcgccgttggcatggcg
cgccaattaaaactgcagctgttcagcggtttcagcgcccatgcggtcgagcaattaatg
acccacgactggccgggtaatatccgtgaacttaaaaacgtagtcgagcgcagcgtttac
cgtaatggtggtgaaaataggcccatcgatcatattaccctcgatccctttgcttcaccg
tatcggcctaaaacgcggatcaagacccgcgaacgtcaaatcacctcagtaacgccaaca
actgttgccagtacgccacaatctgcgccgacatttgaggctgaagtacaagtcaatact
gagtattcaacgaattgctttaattttccgttagattttaaagagcaaacggagcagtac
gaaatggatctgatccagcaagcactttcaaacagccaatataaccaaaagaaaaccgcc
gacatgctcgggttaagctaccaccaactgcgtggcatccttaaaaagtacaatttactt
gataaagcataa
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