Shewanella oncorhynchi: RA178_14320
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Entry
RA178_14320 CDS
T09381
Name
(GenBank) ABC transporter substrate-binding protein
KO
K19226
cationic peptide transport system substrate-binding protein
Organism
sog
Shewanella oncorhynchi
Pathway
sog01503
Cationic antimicrobial peptide (CAMP) resistance
sog02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RA178_14320
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RA178_14320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_14320
Transporters [BR:
sog02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
RA178_14320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WMB71598
UniProt:
A0AA50KAW1
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All DBs
Position
3166640..3168265
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AA seq
541 aa
AA seq
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MSVLIRRLCLTTAVSCMSWLLVACGPQRLPSGLVYCSEGNPESFNPQLVTSGTTIDATSH
QIYSRLVDYDTQSGKLVPALATSWAMSDDGLSYRFTLRENVQFQHSKRFYPTRPFNADDV
LFSFNRIIDTQHPYHFVSRTGYPFFQSIGFSQQVKGIEKINDHEVVFYLTRKDASFLSNL
ATDFAVILSNEYAQQQLALGHPENVDHFAIGTGPFTLVQYAKNEYIRYRRNPDFWGEPAK
IDMLVFDITPKSTVRLAKLIAGDCSVSALPKAGELPVIKQHQELNIESQPGLNVAFWAFN
TQKPPLDDVRVRRALAYAVDKQNILRAVYQNTAIEATGVLPPASWAYENNKGLVDYNPQK
ARDLLKEAGIKNLSINIWAIPVARAYNPNSLKTAELIQSDLANIGVKVNIVSYDWSVFNQ
RLSRDDYDSVLIGWNADNSDPDNFFNPLLSCAAMQSNNNRSRWCNPEFDAILNSAREVSD
QAERKVIYQQAEAFLAEQVPMLSLAHAKRVALTRSDIKDMQLTPFGGISFTHTSQAPKEA
N
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgctaattagacgcctgtgcctaacaactgcagtttcttgcatgagttggttg
ttggtcgcgtgtggcccccaacgactcccttctggtttggtgtattgctccgaagggaac
cctgagtctttcaatccacaattggtgacatctggcacgacaatcgatgccacctcgcat
caaatttatagtcgcctagtggattatgacacccagtcaggcaagcttgtccctgccttg
gcgacgagttgggccatgtctgatgatggcttaagctatcgtttcactctcagggaaaac
gtgcagttccagcattcaaagcgtttttacccaactcgcccctttaatgccgacgatgtg
ttgttctcctttaatcgtattatcgatacccagcatccttatcattttgtctcccgcacg
ggttatcccttcttccaaagtattggcttttctcagcaagttaaagggatagagaagata
aacgatcatgaagtggtcttttacttaacccgcaaagacgcttcttttctgtcgaattta
gccaccgactttgcggtgatcttatcaaacgaatacgcgcagcagcagttagctttaggt
catcctgaaaacgtcgaccactttgccattggtacaggaccgttcactttagtgcaatac
gctaaaaacgaatatatccgctatcgccgtaatcccgatttttggggagagccagcaaaa
atcgatatgctggtatttgatatcacgcccaaaagtacagttaggctcgctaagcttatc
gcgggggattgcagcgtttctgcgctgcccaaagcaggtgaactgcctgttatcaaacag
catcaagaattaaacatcgaatcacaaccaggtcttaacgtagcattttgggcctttaat
acacaaaagccaccgttagatgatgttcgcgtacgtcgtgcacttgcctatgctgttgat
aaacaaaatatcctgcgagcggtttatcaaaatactgccattgaagccaccggcgttctg
ccgccagcatcatgggcctacgaaaataacaaaggacttgtcgattacaatccgcaaaaa
gcacgcgacctattaaaagaagctggtataaaaaatctcagcatcaatatttgggccata
ccggttgcccgcgcttataaccccaattcgttgaaaacggccgaattaattcaatccgat
ttagcaaacatcggcgtaaaagtgaatatcgtcagttacgattggagcgtatttaatcag
agactgagccgcgacgactatgattctgtgctgattggctggaatgctgataacagcgat
cccgataacttttttaatccgctgctgagctgtgcagcaatgcaatcaaacaacaatcgt
tctcgctggtgtaaccctgagtttgatgccatcttaaacagcgcaagggaagtatcagat
caagcggaacgtaaagtgatttatcaacaagcagaagcctttttagctgaacaagtacct
atgctgagtctggcccatgccaaacgtgtagcgttaactcgcagtgatatcaaggatatg
cagcttacgccttttggtggtatttccttcacccatactagccaagcaccaaaggaggcg
aattaa
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