Shewanella oncorhynchi: RA178_14340
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Entry
RA178_14340 CDS
T09381
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K19230
cationic peptide transport system ATP-binding protein
Organism
sog
Shewanella oncorhynchi
Pathway
sog01503
Cationic antimicrobial peptide (CAMP) resistance
sog02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RA178_14340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RA178_14340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_14340
Transporters [BR:
sog02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
RA178_14340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_22
SMC_N
oligo_HPY
AAA_16
AAA_29
nSTAND3
RsgA_GTPase
NACHT
AAA_18
DUF87
NB-ARC
AAA
AAA_30
MMR_HSR1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WMB71602
UniProt:
A0AA50Q485
LinkDB
All DBs
Position
3171165..3171950
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AA seq
261 aa
AA seq
DB search
MTTPLLKVNDLYKRYDTGYKGFSRQYNDALAPVSFELERGETLAIVGEAGSGKSTLARIL
VGAEPRSGGEIFFEGEALDSRNVKQRCRLIRMIFQDPNTSLNPRLTIGQLLDEPLRFNTQ
MSAQSRHTQVVDTLRKVGLLPEHAEFYPHMISEGQKQRVAVARALMLNPKIIIADEALTA
LDLSVRSQILNLLLKLQKDLGLSYIFVSHNLNIIRHVSDKIMVLHKGVMVEKADTEQIFN
SPKHEYTQRLVQEQSLFVHKR
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccccactgcttaaagttaatgacctttataaaagatatgatactggttataag
ggcttttcccgccaatataacgatgcattagcgcccgtatcctttgaactcgaacgcggt
gaaaccttagcgatagtgggtgaggcgggttcaggtaaaagtaccctcgcccgcatttta
gtcggtgcagagccccgcagcggtggtgagatttttttcgaaggtgaagccttagatagc
cgcaatgtgaagcaaagatgccgcttaattcggatgattttccaagatccgaatacttca
ctgaacccgcgcctaacgattggtcaattgctcgatgagccgctgcgtttcaacacccaa
atgtctgcgcaatcgcggcacacccaagtggtcgataccttacgaaaagtaggtttatta
cccgagcacgcggagttttatccgcacatgatttccgaagggcaaaaacaacgagtcgca
gtagcacgagccttaatgctcaatcctaaaattatcattgccgatgaagccttaaccgct
ctggacctttcggtgcgttcgcaaattcttaatttgctgttaaaactgcaaaaagatctc
ggcttgtcttatatcttcgtgtcccataatctcaatattattcgccatgtcagcgataaa
attatggtactgcacaaaggtgtaatggttgaaaaagctgatacagaacaaatatttaat
tcaccaaaacatgaatacacccagaggttggtccaagagcagagtctgtttgttcacaaa
cgctaa
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