Shewanella oncorhynchi: RA178_14965
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Entry
RA178_14965 CDS
T09381
Symbol
tyrR
Name
(GenBank) transcriptional regulator TyrR
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sog03000
]
RA178_14965 (tyrR)
Transcription factors [BR:
sog03000
]
Prokaryotic type
Other transcription factors
Others
RA178_14965 (tyrR)
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_50
AAA_5
ACT
AAA
AAA_2
ACT_4
PAS
Mg_chelatase
HTH_10
HTH_36
ACR10_N
bpMoxR
bHLH-TF_ACT-like_plant
HTH_ParB
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WMB71716
UniProt:
A0AA50KC63
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All DBs
Position
complement(3314299..3315837)
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AA seq
512 aa
AA seq
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MRLEVSCQDRVGLAKDILVVLERYGINLIAIDASNQGFLYLQFAEISFETLSALMPQIRK
VESVHDVRTVSFMPSEQEHYALKTLLKTLPDSVFSIDAKARIRIVNESALLNIGMGEHEV
LEESLNHWVQGFNFSRWLSEAQVLPQAARVQIGPNEYLAEMLPIYLPDEDEKTILVGAVV
SLKSPARVGKQFNALQNQTTGFENVLASSDKMKEVLKQARRMAQLDAPLLITGETGTGKE
LMARASHDAGMRREKPFIAINCAALPDSAAEEELFGYVSQGKVVKRGFFEEAKGGTVFLD
EVAEMSRAAQVKLLRLLQDGTFRRIGGDEEVRADVRIICSTQKNLAELCQTGEFREDLYY
RIHVLSYHIPSLRERKVDIIPLTEMFLEHYSQQLSSPVRRISAQCRDHLLTYAWPGNVRQ
LKNAVFRAVSMWDGSAELTVEQLKLPSYAEGFGYFDNEFEGNLDDAMKQFEASLLRRLYP
AYPSTRQLAKKLGVSHTAIANKLREYKIAKRR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttggaagtcagctgtcaggatcgtgttggtttagccaaagatatcttagtcgtg
ttagagcgttatggtattaatttaattgccattgatgccagtaaccaaggattcctgtac
ttacaatttgccgaaatcagttttgaaaccttgagtgccttgatgccgcagatccgcaaa
gtggaaagcgtgcacgatgtgcgtacggtgtcatttatgccctcagagcaagaacattac
gcccttaaaaccctgctcaaaaccttaccggactccgttttttctatcgatgccaaggct
cgtatccgtatcgttaatgagtccgccttgctcaatatcggcatgggtgagcacgaagtg
cttgaagagtcgcttaatcattgggtgcaaggttttaacttcagccgttggttgagtgaa
gcacaagtattgccacaagcggcgcgagtacaaatcggtccaaacgaatatttagcggaa
atgctgccgatttacctacccgatgaggatgaaaagaccatcttggttggtgctgtggtg
tcgctgaaatcccctgcgcgcgttggaaaacagtttaacgcgctgcagaaccaaaccact
ggctttgaaaatgtattagccagcagtgacaagatgaaggaagtgcttaagcaagcgcgg
cgtatggcccagctcgatgcacctttgttgatcacgggtgaaacgggtactggcaaagaa
ttaatggccagagctagccatgatgcggggatgcgccgtgaaaaaccttttatcgccatc
aactgcgccgctctacccgacagcgctgccgaagaggaattattcggttacgtcagtcag
ggcaaagtcgtcaaacgaggcttttttgaagaagctaaggggggcacagtatttctcgat
gaagtggcggaaatgtctagggcggctcaagttaagctgctacggctattgcaagatggc
acttttagacgcatagggggcgatgaagaagtgcgtgctgatgtacgaattatttgctcg
acccagaaaaatttagctgaactatgccaaaccggcgagtttagggaagatttgtactat
cgcatccatgtgctgagttatcacatcccgtccttacgcgagcgtaaagtcgatattatt
ccactgacggaaatgttcctcgaacattacagtcaacagttgtctagccctgttcggcgg
atttcggcccagtgccgcgatcatttgctcacctacgcttggccaggtaacgtacgccaa
ttaaagaacgcggtctttagagccgtgtctatgtgggatggctcggccgagttgacggta
gaacagctgaaattgccgtcatacgccgaaggttttggttactttgataatgagtttgaa
ggcaatctcgacgatgcaatgaagcagtttgaagcgagtttgttgcgtcgattatatccg
gcctacccgagcactcgccagttggcgaaaaagctaggtgtatcacacacagctattgct
aataaactgcgtgaatacaagatagccaagcgccgttag
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