Shewanella oncorhynchi: RA178_15275
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Entry
RA178_15275 CDS
T09381
Name
(GenBank) beta-ketoacyl synthase N-terminal-like domain-containing protein
Organism
sog
Shewanella oncorhynchi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP-binding
ketoacyl-synt
Ketoacyl-synt_C
Acyl_transf_1
KR
KAsynt_C_assoc
adh_short
PS-DH
PKS_DH_N
Motif
Other DBs
NCBI-ProteinID:
WMB71773
UniProt:
A0AA50KAZ9
LinkDB
All DBs
Position
3385779..3393926
Genome browser
AA seq
2715 aa
AA seq
DB search
MSHTPSVPHSTTDSKAESKKDKRLNKRLKDMPVAIVGMASIFANSRYLNKFWDLISEKID
AITDIPDTHWRTEDYYDADKSKADKSYCKRGGFMPEVDFNPMEFGLPPNILELTDTSQLL
SLIVAKEVLADANLPADYDRDRIGITLGVGGGQKISQSLNSRLQYPVLKKVFKSSGLSDE
DSEMLIKKFQDQYIHWEENSFPGSLGNVIAGRIANRFDFGGMNCVVDAACAGSLAAMRMA
LTELTEGRSDMMITGGVCTDNSPSMYMSFSKTPAFTTNETIQPFDIDSKGMMIGEGIGMV
ALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALERAYDDAGFAPHSIG
LVEAHGTGTAAGDVAEFNGLKSVFAQGNDTNQHIALGSVKSQVGHTKSTAGTAGVIKAAL
ALHHKVLPATINVSKPNPKLNIESSPFYLNTETRPWFQRADATPRRAGVSSFGFGGTNFH
LVLEEYKPEHSRDEQYRQRSVPQTLLFAAANKAALLSELKAALSQSVNTSANANKSSAAN
LNAIAQQYPLRALASTDARLGFVAKDIAQLQAQLNQAISHLESSAHLESGHLETNAIEAW
QLPSGISYRSHALVAKNESKKVAALFAGQGSQYLNMGRELACHFPEMRQQITASDKVFAH
HGQTPLSNILYPIPAFDADAVKAQEAALTNTLFAQSAIGAVSMAQYSLLTQAGFAPDMVA
GHSFGELSALCAAGVISNEDYVELAFARGHAMAQVPSDTASKAADTGTQTDLGTMFAIIL
KQKNDIDALNSCLAQFDGVKIANYNAPTQLVIAGGTEQTQLAAKAISELGFKAISLPVSG
AFHTPLVGHAQKPFAKAIDKAKFSAPSVALYANGTGQLHPTDGKAIKAEFKQHMLQSVRF
SEQLQAMYDAGARVFVEFGPKNILQKLVENTLGEHLNELCLVSMNPNPKGDSDSQLRLAA
VQLAVAGVALTEVDPYQAVTSQEIAEREAPSAMNIKLTATNHISAATKAKMAKSLATGSV
SSQVQYVDRIVETVVEKEVEKIVEKEVIVEKVVEKIIEVEANQVAAVEMKQTSPSVTQGL
SHHQQQATAPLNPSTASVSGDALTAFFSAQSQAAQLHQQFLAIPQQYGDTFTTLMTEQAK
MASLGIAIPESLQRSMEMFHQHQAQTLQSHTEFMQLQSSSSQAALAMLNNAPINFTPAVA
SQPRATASAPAPVAATTVAHNAAPVAAQAVATRPAVSTPVAPVVQTAPVAYSPAVTVQVA
PAAPALVMPAVVMQEVTPVATATSGLSAALVQQTMMAVVADKTGYPTEMLELSMDMEADL
GIDSIKRVEILGTVQDELPGLPELSPEDLAECRTLGEIVDYMNSKLPAAGQVVASTTAPT
APAVNGLSAALVQQTMMAVVADKTGYPTEMLELSMDMEADLGIDSIKRVEILGTVQDELP
GLPELSPEDLVECRTLGEIVNYMNSKLPAAGQVVVSTTTPTTPAASGLSAELVLQTMMAV
VADKTGYPTEMLELSMDMEADLGIDSIKRVEILGTVQDELPGLPELSPEDLAECRTLGEI
VNYMQSKLTQNDKLPAAGAVIVATHVTTAAPAANGLSAALVQQTMMAVVADKTGYPTEML
ELSMDMEADLGIDSIKRVEILGTVQDELPGLPELNPEDLAECRTLGEIVDYMNSKLPVIS
AVAVAPPAKVEATPAQVPANNGLSAALVQQTMMAVVADKTGYPTEMLELSMDMEADLGID
SIKRVEILGTVQDELPGLPELNPEDLAECHTLGEIVALFSKEIGQSKLGQNAVSQNAAPV
SAVVQPEPTIDLPPHDLPPHSEVVLKKLPAAAELTQQSAQKALPRVFAKDACIIISDDGH
NAGVLAEKLHAQGLTVAVVRSPESLVASASPLNSHIASFTLAAIDDTSISAVINEIKSLG
TVAGFIHLQPQHKTSADAKGLVLSSAAKASVEQAFLFAKYLQPLLTTAATANTGSSFISV
SRIDGGFGYLNHSQIARSELNQAALAGLTKTLSHEWPSVHCRALDIAPVLDAKQLAHAVI
AELFATDNVLEVGVSQGAAQALERVTLVAGKADTRHGAANLTSADKILVTGGAKGVTFEC
ALSLAKRSKAHFILAGRSSQQAIPAWAQGKNNSELKAAAITHIQSLGEKPTPKQVDALVW
PVQSSLEIAAALQAFTAVGASAEYLSLDVNNPDAIASTIVPITELSPITGIIHGAGVLAD
KHIQDKTLDELARVYGTKVTGISNLLAALDLDKLKLIALFSSAAGFYGNTGQSDYAMSND
ILNKAALQLAQQLPNAKVMSFDWGPWDGGMVNPALKKMFMDRGVYVIPLKAGAELFASQL
LSNTGAQLLVGTDMQGTVPSDEQATQGSNLKKPEADLTTDASGPHALLNALNPSAVNISA
VKLQRTLDPKAMIFIEDHCINGNPVLPTVCAIQWMREAAFDVLKQPVKVQSYKLLKGIIF
DTAVLQNGVLESAAPITLELELAPIALTDKAAKDTDECLSEQFSALISFEGRPQYQAILV
IDDAAIDNLATNSKATAFDAHSLAGLSAITTASSLYSDGTLFHGPRLQGIESVVKFDDAS
LVAKVSLPHVALADCGDFVPNLTPKGSQAFAEDLLLQAMLVWARLKYGAASLPSSIGEFI
SHAPFAFGDKGHLVLEVVKHSGRALEANITLYHQDGRLSCEMNNAKVTISKNLNGAFLTN
KVANKAIESVEAKVE
NT seq
8148 nt
NT seq
+upstream
nt +downstream
nt
atgagccataccccttctgtacctcattcaaccactgactcaaaagctgagtcaaaaaaa
gataaacgactcaacaaacgcttaaaagatatgcccgttgccatcgtcggcatggccagc
atcttcgccaactcacgctatttaaataaattttgggatttgatcagcgaaaaaatcgat
gccattacggatatccctgatacccattggcgcaccgaagattactacgatgccgacaaa
agcaaagccgataaaagctactgtaaacgcggcggttttatgcctgaagttgacttcaat
ccgatggaatttggtctgccgcccaatattcttgagctgacggatacctcgcagttgctg
tcgctgattgtcgccaaagaagtgctcgccgatgctaatctgcccgccgattacgaccgt
gaccgtatcggcatcaccctaggcgtgggcggtggtcaaaaaatcagtcagagcttgaac
tcgcgcctgcaatatccagtgctaaaaaaagtatttaaaagcagcggcctgagcgatgaa
gacagcgaaatgctgatcaaaaagttccaagaccaatatatccactgggaagaaaactct
ttcccagggtcattaggcaacgtgattgcaggccgtatcgccaaccgttttgattttggc
ggcatgaactgcgtagtcgatgcagcctgtgcaggctcgcttgccgccatgcgcatggcg
ttgactgaactgaccgaaggtcgcagcgacatgatgatcaccggcggcgtctgtaccgac
aactcgccatccatgtacatgagcttctcaaaaacgccagccttcaccactaacgaaacc
attcaaccctttgatatcgattcaaaaggcatgatgatcggcgaaggaatcggcatggtc
gcgcttaagcgccttgaagatgccgagcgcgatggcgaccggatttatgccgtcatcaaa
ggcgttggcgcctcatcggacggtaagtttaagagtatttatgcaccgcgccccgaaggc
caagctaaagcattggagcgcgcctacgatgacgcgggttttgccccgcacagcattggc
ttagttgaagcccatggcacaggcacagccgcaggtgatgtggctgaatttaatggttta
aaatcagtatttgcccaaggcaacgacacaaatcaacatatcgcgttaggttcagtaaaa
tcccaagtgggccacactaaatcaaccgcaggtactgcaggggtgatcaaagccgcgcta
gcgctacaccacaaggtattgcctgcgaccattaacgttagtaagcctaatccaaaactg
aatatcgaaagctcaccattctatttaaataccgaaactcgcccatggttccagcgcgcc
gatgcaacgccgcgccgtgcaggtgtaagctcctttggttttggcggtacgaacttccat
cttgtattagaagaatacaaacctgagcacagccgtgacgagcaatatcgtcagcgcagt
gtgccgcaaacgctattgtttgccgcagccaataaagccgcgctgcttagcgagttaaaa
gctgcgctgagccaaagcgtgaacacaagcgcaaacgcgaataagagcagcgctgcgaac
ctaaacgctatcgctcagcaatatccgctgcgcgcgctggcaagcacagatgcccgttta
ggttttgtggctaaggatatcgcacagctgcaagctcagttaaatcaagccatctctcat
ctagaaagcagtgcgcatttagaaagcgggcacctagaaaccaatgcaattgaagcgtgg
caattaccttctggtatcagctaccgctcccatgccttggtcgctaaaaatgaatcaaag
aaagtagctgccctgtttgctggtcaaggttcacagtacctgaacatgggccgcgaactc
gcctgccatttcccggaaatgcgccaacaaattacggccagcgataaggtatttgctcac
cacggccaaacgccgttatcgaacatcctttatcctattccggcattcgatgccgatgca
gttaaagcccaagaagcggcgctgaccaataccctgttcgcccaaagcgccataggcgcg
gtttcaatggcgcaatattcgctattaactcaagcggggtttgcccccgatatggtggca
ggtcacagctttggtgaactgtcagccctttgcgcggcaggcgtgatttccaatgaagat
tacgtcgaactggccttcgcccgtgggcacgccatggcgcaagtgccgagcgataccgcg
agtaaagccgcagacactggaactcaaactgacttagggacaatgttcgccatcattctt
aaacaaaagaatgatatcgatgcgctcaatagctgtttagcccagtttgatggcgttaaa
attgccaactacaatgcgccgacgcaattagtcatcgcaggtggcacagaacaaactcag
ctggccgcgaaagccattagcgaactgggctttaaagcgatttccctgcctgtctcaggc
gcgttccatactcccttggttggacacgcacaaaagccatttgccaaagccattgataaa
gctaaattcagcgcaccttcagtcgcactttatgccaacggtacgggtcaattacaccca
accgatggcaaagcgattaaagcagaattcaaacaacacatgctgcaatcggttcgcttt
agcgaacaactgcaggccatgtatgacgctggcgcccgtgtgtttgttgagtttggccct
aagaacatactgcaaaagttagttgaaaataccttaggtgaacacttaaatgagctttgc
cttgtcagcatgaacccgaatcctaaaggcgacagtgacagtcaattacgcttagccgca
gtacaactcgcggtagccggtgtggcgttaactgaggttgacccctatcaagccgtcacg
tcacaagagattgccgagcgtgaagcaccatcggcaatgaacatcaaactcaccgccact
aaccatattagtgcagcgaccaaagctaagatggccaaatccctcgccactggcagcgtg
tctagccaagtgcaatatgtggatcgcatcgttgaaaccgttgtcgaaaaagaagtcgaa
aaaatcgttgagaaagaagtcatcgtcgaaaaagtggttgaaaaaataatagaagtggaa
gcaaatcaagtggcagctgttgaaatgaaacaaacatccccaagcgttacacaaggctta
agccatcaccagcaacaagcgacggcgccgttgaatccaagcacagcaagcgtcagcggc
gatgcgttaacggcatttttcagcgcacaatctcaagcggcgcagttgcatcaacagttt
ttagccatcccgcagcaatacggcgataccttcacgacactgatgactgaacaagccaag
atggcaagccttggcattgcaatccctgaaagcctgcaacgctcgatggaaatgttccac
cagcatcaagcgcaaaccctgcaaagccacaccgaatttatgcagctacaaagcagtagc
agccaagcggccttggcgatgttaaacaatgcaccgattaactttactccagcagttgca
agtcagccacgagcaactgcgtcggctcctgcacctgttgcggcaacgacagtggcacac
aatgctgcaccagtagcggctcaagctgttgcgacgagacccgcggttagcacacctgtt
gcgcctgttgtgcaaaccgctcccgttgcttattcacctgctgtgactgtacaagttgcg
ccagcagctcctgcattagtcatgcctgctgtagtgatgcaagaagtgacacctgtggca
acagcaacgagcggtttaagcgctgcattagtgcaacaaaccatgatggcagtggtggct
gacaagactggctatccgactgaaatgctggagctcagcatggatatggaagccgattta
ggtatcgattcgattaagcgcgttgaaatcttaggcacagtgcaagacgaactgccgggc
ttacctgaactcagcccagaagatttggccgagtgtcgtaccttaggtgaaatcgttgac
tacatgaacagcaaactgcctgcggctggccaagttgtagcttctacaacagcgccaaca
gctcctgccgttaacggtttaagcgctgcgttagtacaacaaaccatgatggctgtggtg
gctgacaagacaggctatccgactgaaatgttggagctcagcatggatatggaagccgat
ctaggtatagattcgattaagcgcgttgaaatcctaggcacagtgcaagacgagctacca
ggcttaccagagctcagcccagaagatctggttgagtgccgtaccttgggtgaaatcgtt
aactacatgaacagcaaattgccagcggctggccaagttgtcgtttctacaacaacgcca
acaactcctgcagccagcggtttaagtgctgagttagtgctgcaaactatgatggcagtg
gtagccgacaagacgggctaccccactgaaatgctggagctcagcatggatatggaagcc
gatctcggtatcgattcaattaagcgcgttgaaatcctaggcacagtgcaagacgaactg
ccaggtttacctgagctcagcccagaagatttggccgagtgtcgcaccttgggtgaaatc
gttaactacatgcaaagtaagcttacacaaaatgacaagctgcctgcagcgggcgcagtt
atcgtagcaactcatgtgacaactgccgcgcctgccgccaacggcttaagtgctgctctt
gttcaacaaaccatgatggctgtggtcgccgacaagacaggctaccccactgaaatgctg
gaactcagcatggatatggaagccgatctaggtatcgattctatcaagcgcgttgaaatc
ttaggcacagtgcaagatgagctaccgggcttacctgagctgaatcctgaagatctggcc
gagtgtcgcaccttaggcgaaatcgttgactacatgaacagcaaattgccagtaattagc
gcggtagcagttgcaccaccggcaaaggttgaagcaacacctgcacaagttccagcgaat
aacggtttaagcgctgctttagtgcaacaaaccatgatggctgtggtggctgacaagacg
ggctatccgactgaaatgctggaactcagcatggatatggaagccgatctaggtatcgat
tccatcaagcgcgttgaaattttaggcacagtgcaagacgagctaccgggtttgcctgaa
ctcaatcctgaagatctggccgagtgtcacaccttaggtgaaatcgttgcactcttttcg
aaagaaatagggcaaagcaagctaggccaaaacgcggtaagccagaatgctgcgccagtt
agcgctgtcgttcagcctgaacctactatcgatttgccaccccatgatttaccaccacac
agtgaggtggtgctaaaaaagttgccagcggcggctgagctaacgcagcaatcagcacaa
aaagctctgccacgtgtttttgctaaagatgcctgcattatcattagcgatgatggtcac
aatgctggtgtacttgccgagaaattgcatgctcaaggtctaacggttgcggttgtgcgc
tcgccagaaagccttgtagccagtgcatcaccgctcaatagccacattgccagcttcaca
ttggcggcgattgacgataccagcatcagcgcagtgattaatgagatcaaaagcttaggt
acagttgcaggctttattcatctgcaaccacaacataaaacctcagccgatgcgaaaggt
ttagtgttgtccagtgccgccaaagcgtcggttgagcaagcattcttgttcgccaagtac
ttacaacccctgctaacaacagcagcaaccgccaatactggtagtagttttatcagcgtc
agtcgtatcgacggtggctttggttatcttaaccacagccaaattgcccgcagcgagtta
aaccaagcggcattggcaggtctgactaaaaccttgagtcacgagtggccaagcgtgcat
tgccgcgccttagatatcgcgccagtacttgatgccaagcaactggcccatgcggtgatc
gcagagctctttgcaaccgataacgtattggaagtcggtgttagccaaggcgcagcccaa
gcacttgagcgcgtaaccctagttgctggcaaggctgatacccgccacggcgcagcaaac
ttgacgagtgcagataaaatactggtgactggcggcgcaaaaggcgtgacctttgaatgt
gcgctaagtttagccaaacgcagcaaggcgcactttatccttgctggcagaagcagccaa
caagccattcccgcttgggcacagggtaaaaataacagtgaacttaaagccgcagctatt
acccacattcaaagcttgggcgagaaacccacgccaaaacaagtggatgccttagtatgg
cctgttcaaagcagcctagaaattgcagccgcactgcaagcctttaccgctgtgggcgcg
agcgccgagtacttaagtctcgatgttaacaatccagatgcgatcgccagcacgatagtg
ccgatcaccgagttgtcgcctattactggcatcatccatggtgcgggcgtacttgccgat
aaacacatccaagacaaaaccttagatgagttagcacgggtgtatggcactaaggtcaca
ggtataagcaatctacttgccgcactggatttagataaattaaaactgattgccctattc
tcttcggcagcgggtttttacggcaatactggccaaagcgattacgccatgtccaacgac
atactcaacaaagccgcactgcaactggcgcagcaactgccaaatgccaaagtgatgagc
ttcgattggggtccgtgggacggcggcatggtgaatcctgcgctgaaaaagatgtttatg
gatcgcggtgtttatgtgatcccgctaaaggcaggcgctgagttatttgctagccaatta
ctgagcaacacaggcgcacaattgctggtcggtactgacatgcaaggcacagttccaagt
gacgagcaagcaactcaaggtagcaatctaaaaaagcctgaagcggatctgaccactgac
gcgtcgggtccgcatgctttgcttaacgctttaaatccaagcgcagtaaatataagcgct
gtaaaactgcagcgcacactggaccctaaggcaatgatctttattgaagatcactgcatt
aatggtaatcccgtattaccgactgtgtgcgcgattcagtggatgcgtgaagccgccttt
gatgtgctcaagcagcctgtcaaagtgcaaagctacaagctgttgaagggcattattttc
gacactgccgtgttacaaaatggagtgttagaaagtgcagcccccatcacgctggaactt
gaacttgcaccgattgcgttaacggataaagccgcgaaagatactgacgagtgcttgagt
gaacaattcagtgccttaatcagctttgaaggtcgtccgcaatatcaagccatcttagtg
atagatgacgcggcgattgataacttagccactaacagcaaagcaactgcctttgacgcg
catagcttggcagggctttctgccatcacaaccgcgagcagcctttacagcgacggcacg
cttttccacggcccgagactgcaaggtattgagtctgtggtgaagtttgacgatgcgagc
ttagtcgccaaggtgagtcttccccatgttgcgttagcagactgcggggattttgtgcct
aatctcacgcctaaaggctcacaagcttttgcagaagatttgttgctacaggcgatgctg
gtgtgggcgagactcaaatatggcgcggcgagtttgccatcaagcattggtgagtttatc
tcccatgcgccgtttgcctttggcgataaaggtcatttagtgctcgaggtggtgaaacac
tctggccgtgcccttgaagccaatatcacgctgtatcatcaagatggccgcttaagctgc
gagatgaacaacgccaaagtcaccatcagcaaaaaccttaacggtgcattcttaaccaat
aaagttgctaataaagccattgaaagcgtggaggccaaagtcgagtga
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integrated database retrieval system
