Shewanella oncorhynchi: RA178_15320
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Entry
RA178_15320 CDS
T09381
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
sog
Shewanella oncorhynchi
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_2
HTH_30
AAA_16
HTH_50
HTH_28
HTH_Tnp_ISL3
AAA_22
Phage_CP76
HTH_7
MCM
Mor
nSTAND3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WMB71782
UniProt:
A0AA50Q4E6
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Position
complement(3408629..3409999)
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AA seq
456 aa
AA seq
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MARLTLFYHLQDVGAEQAIIELAGAADFNKLRSVDDLPWIEQLGANHVDVAIIELSSLSR
EDYLVLLDNTAMSNIEFIFLSDGQPNPNLDQLMSHFAGYHFRKPYDMPLISEIFADFAQY
LASSPNRLHPFASELDQYGLLVGSSAPMHKLYRTIRRVSATGSNVLIIGESGVGKELVAN
TIHLASPRVNEPFIAINCGALSPELVDSELFGHVKGAFTGANRDHKGVFEQAEGGTLFLD
EVTEMPIDHQVKLLRVLENSEYRPVGGDKVQRANVRIVAATNRDPIVAIEAGLFREDLYF
RLAQFPIRVPPLRERGEDIIGLAQHFLAYRNVAEKQNKSLAEDCIQMIAKYPWSGNVREL
KHAIERAYILADQDILPSHLQLPQTNEVGLCGGEQVVIPQGMRLDDLERIAIYQALETTQ
GNKTDTAEQLGISVKTLYNKLSKYEQQVETGETTAE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctcgactgacacttttttatcacttgcaggatgttggcgccgagcaagcaatcatc
gaacttgctggcgctgctgactttaataagctacgcagtgtcgatgacttgccttggata
gagcagctaggggcaaatcacgtcgatgttgccattattgagttatccagtcttagtcga
gaagattaccttgtgctgctggataatacggccatgtcaaatattgagtttatttttctc
tccgatggtcagccaaaccctaatcttgatcagttaatgtctcattttgcgggttaccac
tttcgcaaaccttacgatatgccgctaatcagcgaaatttttgctgattttgcacagtat
ttagcatcatcgcctaatcgactgcatccttttgctagcgagctagaccaatacggtttg
cttgttggttcatcagctcctatgcacaagctatatcgtacaattcgtcgcgtctctgcg
acaggcagtaatgtgctgattattggggaaagtggggtcgggaaagaactggttgctaat
accatacatcttgccagccctagggtgaacgagccttttattgcgattaactgtggtgca
ttaagccctgaattggtcgacagtgagctgtttggtcatgtcaaaggcgcatttacgggg
gcgaatcgcgatcacaaaggcgtatttgaacaggctgaaggcgggaccttgtttctcgat
gaagtcaccgaaatgccgattgatcatcaagtgaagttactcagagtgttggaaaatagc
gagtatcgtcctgtgggtggcgacaaagtgcaacgtgcaaacgtacgtattgtggcagcg
actaaccgtgatcccatagtggcgatagaggctgggctatttcgagaagatttgtacttt
cgtttggctcagtttcccattcgcgttccgcccttacgggaacgtggcgaggatattatt
gggcttgcgcagcattttcttgcctatcgtaacgtggccgaaaagcagaataagagctta
gctgaagactgtattcagatgattgctaagtacccttggtctggtaatgtgcgcgaatta
aaacatgcaattgagcgagcctatattctggccgatcaggatattttacccagccattta
cagctacctcagacgaatgaagtgggtttatgtggtggtgagcaagttgttatcccccaa
ggcatgcgcttagatgatttagagagaatcgctatttatcaagcactagaaaccactcaa
ggtaataaaacggataccgccgaacaactggggatcagcgttaaaaccctctacaacaag
ctcagcaagtacgagcagcaagtcgagaccggtgaaacgactgctgaataa
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