Shewanella oncorhynchi: RA178_15745
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Entry
RA178_15745 CDS
T09381
Name
(GenBank) glycogen/starch synthase
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00500
Starch and sucrose metabolism
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
Module
sog_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RA178_15745
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sog01003
]
RA178_15745
Enzymes [BR:
sog01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
RA178_15745
Glycosyltransferases [BR:
sog01003
]
Polysaccharide
Storage polysaccharide
RA178_15745
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Glyco_trans_4_4
RFX5_N
Motif
Other DBs
NCBI-ProteinID:
WMB71867
UniProt:
A0AA50KBZ5
LinkDB
All DBs
Position
complement(3517587..3519206)
Genome browser
AA seq
539 aa
AA seq
DB search
MKQRILMVAAENGALAGAKVGGMADVIRDLPAALAGVDLCADVIMPSYGFLTAVANQPQD
LGELTVAFGGRLERVHLFAMPHPHVPEAMIYLLEHALWQSVPGQIYSQGSAERPFADDAT
KFAFLCASVATALVTGRVPMPTVLHLHDWHAGCLAMLRAFVPEFSVLKEIECVFSIHNLA
LQGIRPLSQDSSSFAAWFPELFATLTLGQKQLITDPRYPYCVNPMRMGIVLSDKVHLVSP
SYAKEVLQPSKPEAGFFGGEGLEHDLQVKANDGKVVGILNGCVYSSVSDLPAKPPARIQV
PEFKQLLSAIETALVQWQGHQTQVSGVDMIAFARTQAHWRQAMAEQVPSLLLTSVGRLTD
QKVLLLRHQLPSGLSVLETLLKALKQTKPTALLILLGSGDASIAKSFQALGAKYDNLLFL
QGYNEALSEALYQHGDLFLMPSSFEPCGISQMLAMRAGQPCLVHSVGGLKDTVEDGVNGF
AFNGNSLNEQAEAFLQRLTQAIACFEGKTWPQVRAAAMAQRFDWHSIAEQYRQQLYCKM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacaacgcattttgatggtcgcggctgaaaacggtgcccttgcgggcgccaaggtt
ggcggtatggcggatgtcatccgtgatttacccgccgctctggcgggtgttgatttgtgc
gccgatgtgatcatgccaagctatggctttttaactgcggtagcgaatcaaccccaagat
ctgggtgagttaactgtggcctttggtggtcgcttggagcgagtgcatttgtttgccatg
ccccatccccatgtgccagaggcgatgatttatctgctcgaacatgcattatggcaatcc
gtacctgggcagatttatagccaaggcagtgccgagcgtcctttcgccgacgatgcgact
aagtttgctttcctttgcgcgagcgtcgcgacagcattagttactggccgagtgcctatg
ccgactgtgctgcatttacatgactggcatgcgggctgcttagccatgttaagagcattc
gtgcctgagttcagtgttctcaaagaaattgagtgtgtgttctctatccacaatcttgca
ctgcaggggatacgtcccttaagccaagactcatcctcctttgcggcttggtttcccgag
ctgtttgccactttgacgctggggcaaaaacagttaattactgatccccgttatccctac
tgtgttaaccctatgcgtatgggcatagtgctgagcgacaaagtgcatttagtctcgccc
agttatgccaaggaagtgttgcagccctccaaaccagaggcgggattctttggtggtgaa
gggctagaacatgacttacaggtcaaggccaatgacggcaaagtggtggggattttaaat
ggctgtgtatattcgtcagtatcggatttacccgctaagccacctgcgcgtattcaagta
cccgagttcaagcaattgctcagtgcgattgaaactgcgttagtgcaatggcaggggcat
caaacgcaagtgagtggcgtggacatgattgcttttgcccgcacccaagcccattggcgt
caagcaatggcggagcaagtaccgagtctgttattgacttcggtgggccgtttgaccgat
caaaaagtcttactgctgcgccatcaattgccctcgggtttatctgtgcttgaaacctta
cttaaagcattgaagcaaacaaaaccgacggcgctgctgattttactcggcagtggcgat
gcatcgattgctaagtcttttcaagcgttaggggctaaatacgataacctattatttttg
cagggatacaacgaggcgttatccgaagcgctgtatcagcatggcgatctgtttttgatg
ccaagttcctttgagccctgtggcatcagtcaaatgttggccatgcgcgcgggacagcca
tgtttagtgcatagtgtaggcggtttaaaggataccgttgaggatggcgttaatggtttt
gcttttaacggcaatagcttaaatgagcaggccgaagcgtttctgcaaaggttgacgcaa
gccattgcttgtttcgaggggaaaacatggccacaagtgcgtgctgcggccatggcacag
cgttttgactggcattctattgcagagcaatatcgtcaacaactctattgcaaaatgtaa
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