Shewanella oncorhynchi: RA178_15765
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Entry
RA178_15765 CDS
T09381
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00500
Starch and sucrose metabolism
sog01100
Metabolic pathways
sog01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RA178_15765 (glgX)
Enzymes [BR:
sog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RA178_15765 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GHL5
Motif
Other DBs
NCBI-ProteinID:
WMB71871
UniProt:
A0AA50Q569
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All DBs
Position
complement(3523285..3525501)
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AA seq
738 aa
AA seq
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MQKPTADDIKLNPDAKNHPFQSEKWALGVGEPFPLGANVEGDGVNFALFSANATAVELCL
FDDNGEQEIARIVLTEQTQQIWHVFVQGLKAGQLYGYRVYGSYEPQLGHRFNPNKLLLDP
YARQLVGEYHDHESNYGYELNHMDEDLSFSKLDNTAYVPKCKVVDIRPLIEIAAKQSIQP
LATRFQPKPLERSIIYEMHVKGFTAVHPEIEPHKRATFAGLATQPAIDYLTELGVTCVEL
LPVQAFFTEPFLLEKKLTNYWGYNSIGFFAPEPSYLSSDNIGEFRAMVDALHGAGIEVIL
DVVYNHSAEGSRLGPTFSFRGIDNLSYYRLHPNDKRFYINDTGCGNTLNINHPRMLQLVL
DSLRYWVEIMGVDGFRFDLAACLGREAYGFDPGSGFFDALLQDPVLCRVKLIAEPWDIGP
GGYQLGNFPVAFSEWNDRYRDTMRRFWRGDHSMLPEFARRFHGSGDFFEHSGRPPATSLN
FLTSHDGFTLKDLVSYTQRHNLANGEDNRDGHQENFSHHYGIEGETEDSSILELRSRQQR
NLLTTLFLSQGVPMLLSGDETGRTQQGNNNAYCQDNELNWFDWSAKDMDTELLAFTQQLI
ALRKRFPLLCAKRFIHEQLLAESLADIGTRLDWFSRQGEQMTKSLWTESMCRSLSVVLSG
DLEDQGKQQALLLMVNADDNPLAFTLPTFEHLSPWQCLIHTQTEPLDVQISATRYLLQDR
SLMLFHADFIGNEGINYE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcccacggctgatgatattaagctcaaccctgacgctaaaaaccacccattt
caaagcgaaaaatgggcgttaggggtaggtgagccttttccgctcggtgctaatgttgaa
ggcgatggcgtcaactttgcgttattttcagctaacgccacagcggtcgagttatgttta
tttgatgacaatggcgagcaagaaatcgcgcgtattgtgttaactgaacaaacccagcaa
atctggcatgtgtttgtgcaagggcttaaggcggggcaactctacggttatcgcgtttat
ggctcctatgagcctcagcttggtcacagatttaaccccaataaattattgctcgacccc
tatgcgcgccagctcgtcggtgaatatcacgaccatgagtctaactatggttacgagctg
aaccacatggatgaagacttatctttcagtaagttagataacactgcctatgtgccaaaa
tgcaaggtcgtggacattcgtccattaatcgagatagctgccaagcagtcgattcagccc
cttgcgacgaggtttcagcccaaacccctagagcgcagcatcatttatgagatgcacgtt
aaaggctttacggcggtgcatcctgagattgaaccccataaacgtgccacctttgcgggc
ttagcgactcagcctgctatcgattatttgaccgaacttggggtgacgtgtgtcgagtta
cttcctgtacaggcctttttcactgagccatttttgctcgagaaaaagctcactaactat
tggggctataacagtatcggtttttttgcccctgagccgagttatctgtcatccgacaac
attggtgagtttcgggccatggtggatgcacttcacggcgcaggtatcgaagtgatcctc
gatgtggtctataaccacagcgccgaggggagtcgacttgggccgacctttagttttcgt
ggcatagataatctcagttattaccgcctgcatccgaatgataagcgtttttatattaat
gatacgggttgcggaaacaccttaaatatcaatcatccacgcatgttacagctcgtacta
gattcgctgcgttattgggtagaaatcatgggcgtcgatgggtttcgcttcgacttggcg
gcttgcttaggtcgcgaggcctatggttttgatcccggctcaggtttcttcgatgcgctg
ttgcaagaccctgttttatgccgagtgaaattaattgctgagccttgggatatcggcccc
ggtggttatcaattgggcaatttccccgtggcctttagcgagtggaacgacagatataga
gacactatgcgccgcttttggcgcggcgatcacagcatgttgcccgaatttgctcggcgt
tttcacggctcgggggatttttttgagcacagtggccgtccacctgcgaccagtcttaat
tttttaaccagtcacgacggttttactcttaaagacttagtgagttatacccagcgccat
aacttggcaaatggggaggataaccgcgatggtcaccaagaaaacttcagccatcattat
gggattgaaggggaaaccgaagatagctcaattctagaacttcgcagtcgtcaacaacgt
aacttattgactacgctatttttatctcaaggtgtgcctatgttgttgagcggtgatgag
acaggccgcactcagcaaggcaacaataatgcctattgccaagacaatgaactgaactgg
tttgattggtcggcaaaggacatggacactgagctgttggcctttactcaacagcttatt
gctctgcggaaacgtttcccgctgttatgtgctaagcgcttcattcacgaacagttattg
gctgaatccttagccgatattggtactcgattagattggtttagtcgccaaggtgaacaa
atgaccaagagcttgtggaccgaatctatgtgccgcagtttgtctgtggtgctttccggt
gatttagaagatcaaggcaagcagcaagctttgctgttgatggttaatgccgacgacaat
cctctcgcttttaccctgccgactttcgagcacttgagtccgtggcaatgccttattcat
acccaaactgagccgctggatgttcagatctctgcgacgcgatacttactgcaagatcgt
agtctcatgctttttcatgctgattttataggaaatgaaggaattaactatgagtga
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