Shewanella oncorhynchi: RA178_16020
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Entry
RA178_16020 CDS
T09381
Symbol
slyD
Name
(GenBank) peptidylprolyl isomerase
KO
K03775
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:
5.2.1.8
]
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sog03110
]
RA178_16020 (slyD)
Enzymes [BR:
sog01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
RA178_16020 (slyD)
Chaperones and folding catalysts [BR:
sog03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
FKBP
RA178_16020 (slyD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKBP_C
Motif
Other DBs
NCBI-ProteinID:
WMB71916
UniProt:
A0AA50Q582
LinkDB
All DBs
Position
3591036..3591692
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AA seq
218 aa
AA seq
DB search
MKITQHSAVTIHYRLSDQEGRLLEDSFDSEPMLYLHGTENLIPGLEAALDGKSKGEKLDV
TISAEEAYGPYHDGLRQAVPLEAFGDIEDIVPGMRFIAETEMGQRPVQVMEVKDDVVIVD
GNHPLAGQSLNFSVEIVDVREASAEEIAHGHIHAQGGCGSHGHDHDHGGGCCGGSGKQEA
GGCCGGSDHDHGHHHEEHEACDTPKTGCDGNGGCGCRG
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcactcaacacagcgcggtaaccattcattaccgtttatcagatcaagaaggc
agactattagaagactctttcgactctgaacctatgctatatctacacggcactgaaaac
ctgatcccaggtttagaagccgcattagatggtaaaagcaaaggcgaaaaactcgatgtc
actattagtgccgaagaagcctatgggccttatcacgatggcctacgtcaagcagtgcca
ttagaagcctttggtgatatcgaagatatcgtcccaggtatgcgcttcatcgctgaaact
gaaatgggtcaacgccctgttcaagtcatggaagtgaaagacgatgtggttatcgtcgat
ggcaaccatcctttagcgggccaatcgctcaatttcagcgtcgaaatcgttgacgttcgt
gaagcctcagccgaagaaatcgctcatggccacattcatgcccaaggtggttgtggaagc
catggacatgatcacgaccacggcggtggatgctgtggcggttcaggcaaacaagaagcg
ggcggctgttgtggtggttcagaccacgatcatggacaccaccatgaagagcacgaagcc
tgtgacacacctaaaacaggttgtgacggtaatggcggctgtggttgccgcggctaa
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