Shewanella oncorhynchi: RA178_16195
Help
Entry
RA178_16195 CDS
T09381
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sog03000
]
RA178_16195 (nhaR)
Transcription factors [BR:
sog03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RA178_16195 (nhaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
MarR
Motif
Other DBs
NCBI-ProteinID:
WMB71951
UniProt:
A0AA50KC28
LinkDB
All DBs
Position
complement(3624968..3625876)
Genome browser
AA seq
302 aa
AA seq
DB search
MLHLNYNHLYYFWMIKKKGSVAKAAEALCLTPQTITGQIRALEDRLNGSLFKRVGRTLEA
TELGELVFRYADKMFSLSYEMLDLLNYQKADAMLFEVGIADALSKALVSRVLLSVVPNDN
SMHLACYEATHESLMARLREHKLDMILSDCAGESLKYPEILSKKLGECGVSFFSAETYSA
DFPACLEQGQLLIPGRRTSLGQQLYRWFDEQNLKVSILGEFDDAAMMKAFGYLKRGIFVT
PSIYRQEVISHGMNLLGETTDVKEEYHVMFAERMIQHPAVKRLLDTDFSDLFEGLDTQVQ
QC
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacttgaattataaccacttgtattatttttggatgattaagaaaaagggctca
gtcgcgaaggcggccgaagccctatgtttaacgccgcaaacgataacagggcaaattcgt
gccttagaagataggttaaacggcagtctgttcaagcgagtcgggcggacattggaggcg
acagagttaggtgaattggtgtttcgctacgccgataagatgtttagccttagctatgaa
atgctcgatttacttaattatcaaaaagcggatgccatgttattcgaggtgggtattgcc
gatgccttatctaaagctttagtcagccgagttttattatctgtagtgcctaatgacaat
tctatgcacttagcctgctatgaggcgactcacgagagcctaatggcgcgtttacgtgag
cataaactggatatgatcctttcggattgtgcaggtgagtcactcaaataccctgaaatt
ttatctaaaaaattaggcgagtgtggcgtgagttttttctccgctgagacttatagcgct
gattttcctgcctgtttagaacaaggccagctattaattcccggccgtagaacttcactc
ggacaacagctatatcgctggtttgacgagcaaaatcttaaagtcagtattttgggcgag
ttcgatgatgcggccatgatgaaagcctttggttaccttaaacgaggtatttttgtcact
ccgtcgatttatcgccaagaagtgatttcccatggtatgaatttgctcggtgaaaccacc
gatgtgaaagaggaataccatgtgatgtttgccgaacgtatgatccaacatcctgcagta
aagcgattattggatacagattttagcgatctctttgaggggctcgatacgcaagtacaa
caatgctaa
DBGET
integrated database retrieval system
