Shewanella oncorhynchi: RA178_16300
Help
Entry
RA178_16300 CDS
T09381
Symbol
tyrS
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RA178_16300 (tyrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sog01007
]
RA178_16300 (tyrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sog03016
]
RA178_16300 (tyrS)
03029 Mitochondrial biogenesis [BR:
sog03029
]
RA178_16300 (tyrS)
Enzymes [BR:
sog01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
RA178_16300 (tyrS)
Amino acid related enzymes [BR:
sog01007
]
Aminoacyl-tRNA synthetase
Class I (A)
RA178_16300 (tyrS)
Transfer RNA biogenesis [BR:
sog03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RA178_16300 (tyrS)
Prokaryotic type
RA178_16300 (tyrS)
Mitochondrial biogenesis [BR:
sog03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RA178_16300 (tyrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4_2
S4
TyrRSs_C
Motif
Other DBs
NCBI-ProteinID:
WMB71971
UniProt:
A0AA50KCN6
LinkDB
All DBs
Position
complement(3648945..3650138)
Genome browser
AA seq
397 aa
AA seq
DB search
MADLDQVLAEIRRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRL
FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTRIE
FNSSWLEPLGAAGMIRLASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYDSVAL
QADVELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSAHNYIGVSEP
ANEMFGKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVANGSNPRDIKIALAKEIITRFH
DAASAESAHQAFVDRSKGMIPDDIEEIELAAGEGIAIANLLKDADLVSSTSEAMRMIKQG
AVKMDGEKLEDSRMTLFAGTVAVFQVGKRKFAKVTLV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttagaccaagtattagcagaaattagacgtggtaccgatgagattttactc
gaagcggatctgctggaaaaactcaaagaaggacgtccactccgtattaagttaggcgct
gaccctaccgctccggatatccatcttggacatacagtaatcttaaataaattaagatta
ttccaagagttaggtcatgaagtcatttttttgattggtgactttactggtatggtgggg
gacccaagtggtaaaaatagcactcgtccaccgctcacccgtgaacaagttttagcgaac
gcagaaacctataaagaacaggtttacaagatcctcgatcctgctaagactcgtatcgaa
ttcaactcaagctggttagagccattgggcgccgctggtatgatccgtctcgcgtctaag
caaactgtggctcgtatgatggagcgcgatgactttaagaagcgttatgcctcgggtcag
tcgattgcgattcatgagtttatgtatcctttactgcaaggttatgactcagttgcgctg
caggccgatgttgagttgggggggacagatcaaaagttcaacctgttaatgggccgtgaa
ctgcaaaaagccgaaggccaaaagccacaagctgtgatcatgatgccgctgcttgaaggt
ttagacggcgtgaagaaaatgtctaaatcggcgcataactatattggcgtgagcgaacct
gccaacgaaatgtttggcaagctgatgtcaatttcggatgacttgatgtggcgctacttt
gaactactgtcattccgcccactggctgaaattgaacagtttaagcaagatgtggcgaat
gggtctaacccacgtgacattaaaatcgccttagctaaggaaattatcacacgtttccac
gatgcagcgtctgccgaaagtgcgcatcaagcctttgtcgatcgttctaagggcatgatc
cccgatgatatcgaagaaattgagttagctgcgggtgaaggtattgcgattgccaatctg
ttgaaagacgctgacttagtgtcatcgacttcagaagcgatgcggatgatcaagcaaggc
gcggtgaagatggacggcgaaaagctagaagatagccgtatgactttgttcgcgggtact
gttgctgtattccaagtcggtaaacgtaagtttgccaaagtgactttggtatag
DBGET
integrated database retrieval system
