Shewanella oncorhynchi: RA178_16455
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Entry
RA178_16455 CDS
T09381
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00250
Alanine, aspartate and glutamate metabolism
sog00280
Valine, leucine and isoleucine degradation
sog00310
Lysine degradation
sog00410
beta-Alanine metabolism
sog00640
Propanoate metabolism
sog00650
Butanoate metabolism
sog01100
Metabolic pathways
sog01120
Microbial metabolism in diverse environments
Module
sog_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RA178_16455 (gabT)
00650 Butanoate metabolism
RA178_16455 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RA178_16455 (gabT)
00280 Valine, leucine and isoleucine degradation
RA178_16455 (gabT)
00310 Lysine degradation
RA178_16455 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RA178_16455 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sog01007
]
RA178_16455 (gabT)
Enzymes [BR:
sog01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
RA178_16455 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
RA178_16455 (gabT)
2.6.1.48 5-aminovalerate transaminase
RA178_16455 (gabT)
Amino acid related enzymes [BR:
sog01007
]
Aminotransferase (transaminase)
Class III
RA178_16455 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
WMB72001
UniProt:
A0AA50KCQ7
LinkDB
All DBs
Position
complement(3684815..3686092)
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AA seq
425 aa
AA seq
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MTTTNDSLMARRQAAVAGGVGQIHPIFTARAENATVWDVEGREFIDFAGGIAVLNTGHLH
PKVKAAVAAQLDNFSHTCFMVLGYESYIQVCEKLNQLVPGDFAKKTALFTSGSEAVENAV
KVARAYTKRAGVIAFTSGYHGRTIAALALTGKVAPYSKGMGLMSANVFRAEFPCEMHGVS
DDDAMASIERIFKNDAEPSDIAAIILEPVQGEGGFYAASPAFMQRLRALCDREGIMLIAD
EVQTGAGRTGTFFAMEQMGVAADITTFAKSIAGGFPLSGITGRAQVMDAVGPGGLGGTYG
GNPLACAAALAVIEVFEEEKLLERANAIGERIKSALNVMQVEHAQIADVRGLGAMIAIEL
MEEGKPAPHYCAQVLAEARNRGLILLSCGTYGNVLRILVPLTAPDAQIDAGLGILNASFN
AVLKS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaccaatgattcattgatggcacgtcgccaagccgcagttgcgggtggtgtc
gggcaaattcaccctatttttaccgcccgcgccgaaaatgcgactgtgtgggatgttgaa
ggtcgcgagtttatcgattttgcgggcggcattgccgtgctcaatacgggtcaccttcat
cctaaagtgaaggcggcggttgcggctcagctggataatttttcccatacctgttttatg
gtgctcggctacgagagctatatccaagtatgtgaaaagctcaatcaactggttcctggg
gattttgccaagaagacggcactattcactagtggttcagaagcggttgaaaacgcagtt
aaagtggcgcgtgcctataccaaacgtgctggtgtgattgcgtttacctcgggctaccat
ggtcgcactattgcggctttggcattgaccggaaaagtcgcgccttacagtaaaggtatg
gggctgatgtcggcgaatgtgttccgcgctgagttcccgtgcgaaatgcatggcgtgtcc
gatgacgatgctatggcctcgattgaacgtatctttaaaaatgatgccgagccgagtgat
atcgccgccattattttagagccagtgcagggcgagggcggtttctacgctgcatcgccc
gcctttatgcaacgtttacgcgcattatgcgaccgtgaaggcattatgctgatcgccgat
gaagtgcaaacaggcgcgggccgtacaggcactttcttcgctatggagcaaatgggggtt
gctgcagatatcacgacctttgccaaatctattgcgggtggttttccactctcgggcatt
actggccgcgcccaagtcatggacgcagtgggtcctggtggtcttggcggtacttatggt
ggtaatccgttagcgtgcgctgctgcgcttgctgtcattgaagtgtttgaagaagaaaag
ttgctagaaagggccaatgccattggtgagcgaattaagtctgccctgaatgtaatgcag
gtcgaacatgcgcaaatcgccgatgtgcgtggtttaggcgctatgatcgccatcgaattg
atggaagagggtaaacctgcaccgcactattgcgcgcaagtgttggctgaagctcgtaac
cgtggattgattttattatcttgcggtacttacggtaatgtgctgcgtattttggtgcca
ttaacggcgccggatgcacaaattgatgcaggccttggtattcttaacgccagctttaat
gccgtactgaaaagctaa
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