Shewanella oncorhynchi: RA178_17345
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Entry
RA178_17345 CDS
T09381
Name
(GenBank) TonB-dependent receptor
KO
K16091
Fe(3+) dicitrate transport protein
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_17345
Transporters [BR:
sog02000
]
Other transporters
Pores ion channels [TC:
1
]
RA178_17345
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Motif
Other DBs
NCBI-ProteinID:
WMB72166
UniProt:
A0AA50KD47
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All DBs
Position
complement(3888023..3890077)
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AA seq
684 aa
AA seq
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MPSRYFTVSLCAISVSLACSSTTFADDLHSQMLELNKLNDTFHSTSNRLALGQLTALTVL
PADLSGNPASISMRSATQGIAVLQDRVYFSPAPYSAPQLQLLPNLLQQQSVTAAPMANMA
VGGQGAFGVVSYQTLPVAEQTENSKATLEGNTDSDYSVDMNWGVKQKEYGMILAVNYADN
SGADHLLNGQDTDHQTTDILFKINAASLLGARSPQVTEFTYQFLDDDSYRSQLGLTQADW
QQDPMSLYSATAADKHQGRHHKYQLSHQVTLNGGHKVTTDFYYQSYSQQLNQLNQFDGQM
LDAQSLAALAAFERQPTVDGVELASLQQDNDFSSFGAQTESVNQYGAHQIIYSARYHTDK
AEMRLGDQQSLWQQDLSLVSDAQNALLAYTDDATAFTSAIDSLFNWDELQIKLALAYEQV
SVNRKVDLAYVGLDAADFSDSDWMPQLGVLYDAGDWRFSTDIRRSWTAASAGNLEQEAQV
SLQYQVSAQYASEHFSADIKTYVQDFDNLHVNCDAYTQCADSRLWVQGNVVDVLTKGVEL
NLGYQWDIGSVQLPLVLNYQYSNSEYQTNSCNEIQGCVVAGDRVAWLPEQQLHFSAGMKY
AEYELNANVFYQSEREMGQFGAELQPIAVQWRVDLAANYHFDRHHEIYFRVENLLDESLV
TTASNSGIRSENGRISYLGYQWRF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtcgttacttcactgtatcactttgtgcaatttctgtatctcttgcctgttct
agcacaacgttcgccgatgatcttcacagtcaaatgcttgaattgaacaagctcaatgac
acatttcattcaacgtctaatcgtttagcgttaggtcaattgacggctttgacggttttg
cctgcggatctgagtggaaatcccgcgagcatcagcatgcgcagtgcgactcaaggtatt
gcggtattacaagatagagtgtatttctcacctgcgccttattctgcaccgcaattacaa
ctcttacctaatctgctgcaacaacagagtgttactgccgccccgatggcaaatatggct
gtcggtgggcaaggtgcgtttggggtggtgagttatcaaaccttacctgttgctgagcag
accgagaatagtaaggcgactctcgagggcaataccgattcagactacagtgtcgatatg
aattggggagtgaagcaaaaagagtatggcatgatactcgcggttaattatgcagataat
agcggcgcagatcacttgctcaatggtcaagacacagaccaccaaacgacagacatctta
tttaaaattaacgccgcgagtttactcggcgccagaagtccacaggtgactgagtttact
taccagtttctcgatgatgatagttatcgctctcagcttgggttaacacaggccgattgg
caacaagatcctatgagtttgtattcggccactgcggcggataaacatcaggggcgacat
cataagtaccaactgtctcaccaagttacgctcaatggtgggcataaggtcaccacagac
ttttactaccagtcttattcgcagcaattaaaccaactcaatcaatttgatgggcaaatg
ctcgatgcccagagtcttgctgcgttggccgcatttgaacgtcagccgacagtcgatggc
gtcgaactggcttctttacagcaagacaatgatttcagctcctttggggcacaaactgaa
tcagtgaatcagtatggtgcccatcaaattatctatagcgcccgttatcatacggataaa
gccgagatgcgccttggcgatcaacagagtctatggcagcaggacttgagtttagtgagt
gatgcacaaaatgcgttattggcctataccgacgatgcaactgcatttacttcggcaatc
gattccttgtttaattgggacgaattacagataaagctcgcgcttgcctatgaacaagtg
agcgtcaatcgcaaggtcgatttagcttatgtaggactggatgcggctgatttctccgac
agcgattggatgccacaactcggtgttttatatgatgctggagattggcgctttagtacg
gatattcgccgctcatggaccgccgcaagtgcggggaatcttgagcaagaggcacaagta
tcattgcaatatcaagtcagcgcccaatatgccagtgagcattttagtgctgacatcaaa
acctacgttcaagattttgataacctgcatgtcaattgcgatgcgtatacccaatgtgcc
gacagtcgcttgtgggttcaaggcaatgtcgtggatgtgctgaccaaaggagttgagctg
aatcttggctaccagtgggatattggtagtgtacagttaccattagttttaaattatcaa
tattcgaattcggagtatcaaaccaatagctgtaacgaaatccaaggttgcgttgtggct
ggtgatagagtggcttggttacctgagcagcaattgcattttagtgctggaatgaaatat
gccgaatatgaattgaatgcaaatgtcttttatcaatccgagcgggaaatgggccaattt
ggtgctgaattacaacctatcgcagtacaatggcgggtagatttagcggcgaattatcat
tttgatcgccaccatgagatttattttagggtagaaaatctcttagatgagtcattagtt
acgacagcatcaaatagcggaattcgatcggaaaatggacgtattagctatttaggttat
caatggcgcttttaa
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